Gene : Phvul.007G166600 P. vulgaris v2.1
Defline:  (1 of 1) K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Genomic Order:  1528
Name:  ? Phvul.007G166600 Secondary Identifier:  ? PAC:37165513
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G166600 0.5kb upstream 0.5kb upstream 3219 true Chr07: 28202711-28205929 Phaseolus vulgaris
Phvul.007G166600 0.5kb upstream 0.5kb upstream 500 false Chr07: 28205430-28205929 Phaseolus vulgaris
Phvul.007G166600 0.5kb downstream 0.5kb downstream 3219 true Chr07: 28202211-28205429 Phaseolus vulgaris
Phvul.007G166600 0.5kb downstream 0.5kb downstream 500 false Chr07: 28202211-28202710 Phaseolus vulgaris
Phvul.007G166600 1.0kb upstream 1.0kb upstream 3719 true Chr07: 28202711-28206429 Phaseolus vulgaris
Phvul.007G166600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28205430-28206429 Phaseolus vulgaris
Phvul.007G166600 1.0kb downstream 1.0kb downstream 3719 true Chr07: 28201711-28205429 Phaseolus vulgaris
Phvul.007G166600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28201711-28202710 Phaseolus vulgaris
Phvul.007G166600 2.0kb upstream 2.0kb upstream 4719 true Chr07: 28202711-28207429 Phaseolus vulgaris
Phvul.007G166600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28205430-28207429 Phaseolus vulgaris
Phvul.007G166600 2.0kb downstream 2.0kb downstream 4719 true Chr07: 28200711-28205429 Phaseolus vulgaris
Phvul.007G166600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28200711-28202710 Phaseolus vulgaris
Phvul.007G166600 5.0kb upstream 5.0kb upstream 7719 true Chr07: 28202711-28210429 Phaseolus vulgaris
Phvul.007G166600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28205430-28210429 Phaseolus vulgaris
Phvul.007G166600 5.0kb downstream 5.0kb downstream 7719 true Chr07: 28197711-28205429 Phaseolus vulgaris
Phvul.007G166600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28197711-28202710 Phaseolus vulgaris
Phvul.007G166600 10.0kb upstream 10.0kb upstream 12719 true Chr07: 28202711-28215429 Phaseolus vulgaris
Phvul.007G166600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28205430-28215429 Phaseolus vulgaris
Phvul.007G166600 10.0kb downstream 10.0kb downstream 12719 true Chr07: 28192711-28205429 Phaseolus vulgaris
Phvul.007G166600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28192711-28202710 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303068 5265 Fabidae View MSA
124069349 5270 Rosid View MSA
123747272 5271 Pentapetalae View MSA
122794808 5272 Eudicot View MSA
122048788 5273 Angiosperm View MSA
121348287 5274 Embryophyte View MSA
123425878 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.405 0.0 89.2924 High  
cufflinks 44.5066 0.0 115.046 High High
cufflinks 26.4389 0.0 69.1933   Low
cufflinks 45.6859 0.0 118.105 High High
cufflinks 38.9381 0.0 100.818 High  
cufflinks 27.4635 0.0 71.7795   Low
cufflinks 30.2282 0.0 78.6407 High  
cufflinks 36.3054 0.0 94.0262 High  
cufflinks 29.1674 0.0 75.9427    
cufflinks 32.0357 0.0 83.3567    
cufflinks 40.8458 0.0 105.693 High  

0 Strain