Gene : Phvul.005G007700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31080:SF8 - F23N19.12 Genomic Order:  73
Name:  ? Phvul.005G007700 Secondary Identifier:  ? PAC:37153228
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1081 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G007700 0.5kb upstream 0.5kb upstream 1127 true Chr05: 652182-653308 Phaseolus vulgaris
Phvul.005G007700 0.5kb upstream 0.5kb upstream 500 false Chr05: 652809-653308 Phaseolus vulgaris
Phvul.005G007700 0.5kb downstream 0.5kb downstream 1127 true Chr05: 651682-652808 Phaseolus vulgaris
Phvul.005G007700 0.5kb downstream 0.5kb downstream 500 false Chr05: 651682-652181 Phaseolus vulgaris
Phvul.005G007700 1.0kb upstream 1.0kb upstream 1627 true Chr05: 652182-653808 Phaseolus vulgaris
Phvul.005G007700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 652809-653808 Phaseolus vulgaris
Phvul.005G007700 1.0kb downstream 1.0kb downstream 1627 true Chr05: 651182-652808 Phaseolus vulgaris
Phvul.005G007700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 651182-652181 Phaseolus vulgaris
Phvul.005G007700 2.0kb upstream 2.0kb upstream 2627 true Chr05: 652182-654808 Phaseolus vulgaris
Phvul.005G007700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 652809-654808 Phaseolus vulgaris
Phvul.005G007700 2.0kb downstream 2.0kb downstream 2627 true Chr05: 650182-652808 Phaseolus vulgaris
Phvul.005G007700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 650182-652181 Phaseolus vulgaris
Phvul.005G007700 5.0kb upstream 5.0kb upstream 5627 true Chr05: 652182-657808 Phaseolus vulgaris
Phvul.005G007700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 652809-657808 Phaseolus vulgaris
Phvul.005G007700 5.0kb downstream 5.0kb downstream 5627 true Chr05: 647182-652808 Phaseolus vulgaris
Phvul.005G007700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 647182-652181 Phaseolus vulgaris
Phvul.005G007700 10.0kb upstream 10.0kb upstream 10627 true Chr05: 652182-662808 Phaseolus vulgaris
Phvul.005G007700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 652809-662808 Phaseolus vulgaris
Phvul.005G007700 10.0kb downstream 10.0kb downstream 10627 true Chr05: 642182-652808 Phaseolus vulgaris
Phvul.005G007700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 642182-652181 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304069 5265 Fabidae View MSA
124069066 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.223337 0.0 0.98723 Low  
cufflinks 0.142576 0.0 0.660956 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.00564 0.0 3.91481    
cufflinks 0.0625709 0.0 0.316812 Low  
cufflinks 3.27259 0.0 11.4786   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0801832 0.0 0.397793 Low  

0 Strain