Gene : Phvul.007G147900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR36738:SF1 - EXPRESSED PROTEIN Genomic Order:  1340
Name:  ? Phvul.007G147900 Secondary Identifier:  ? PAC:37166787
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G147900 0.5kb upstream 0.5kb upstream 2169 true Chr07: 24508412-24510580 Phaseolus vulgaris
Phvul.007G147900 0.5kb upstream 0.5kb upstream 500 false Chr07: 24508412-24508911 Phaseolus vulgaris
Phvul.007G147900 0.5kb downstream 0.5kb downstream 2169 true Chr07: 24508912-24511080 Phaseolus vulgaris
Phvul.007G147900 0.5kb downstream 0.5kb downstream 500 false Chr07: 24510581-24511080 Phaseolus vulgaris
Phvul.007G147900 1.0kb upstream 1.0kb upstream 2669 true Chr07: 24507912-24510580 Phaseolus vulgaris
Phvul.007G147900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 24507912-24508911 Phaseolus vulgaris
Phvul.007G147900 1.0kb downstream 1.0kb downstream 2669 true Chr07: 24508912-24511580 Phaseolus vulgaris
Phvul.007G147900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 24510581-24511580 Phaseolus vulgaris
Phvul.007G147900 2.0kb upstream 2.0kb upstream 3669 true Chr07: 24506912-24510580 Phaseolus vulgaris
Phvul.007G147900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 24506912-24508911 Phaseolus vulgaris
Phvul.007G147900 2.0kb downstream 2.0kb downstream 3669 true Chr07: 24508912-24512580 Phaseolus vulgaris
Phvul.007G147900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 24510581-24512580 Phaseolus vulgaris
Phvul.007G147900 5.0kb upstream 5.0kb upstream 6669 true Chr07: 24503912-24510580 Phaseolus vulgaris
Phvul.007G147900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 24503912-24508911 Phaseolus vulgaris
Phvul.007G147900 5.0kb downstream 5.0kb downstream 6669 true Chr07: 24508912-24515580 Phaseolus vulgaris
Phvul.007G147900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 24510581-24515580 Phaseolus vulgaris
Phvul.007G147900 10.0kb upstream 10.0kb upstream 11669 true Chr07: 24498912-24510580 Phaseolus vulgaris
Phvul.007G147900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 24498912-24508911 Phaseolus vulgaris
Phvul.007G147900 10.0kb downstream 10.0kb downstream 11669 true Chr07: 24508912-24520580 Phaseolus vulgaris
Phvul.007G147900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 24510581-24520580 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041422 5273 Angiosperm View MSA
122310679 5265 Fabidae View MSA
124061850 5270 Rosid View MSA
123751922 5271 Pentapetalae View MSA
122793004 5272 Eudicot View MSA
121347775 5274 Embryophyte View MSA
123423846 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.61799 0.0 17.3496    
cufflinks 13.502 0.0 38.1016    
cufflinks 45.6573 0.0 118.283 High High
cufflinks 18.3801 0.0 50.224    
cufflinks 5.08392 0.0 15.9227    
cufflinks 31.6541 0.0 83.3582   High
cufflinks 1.85226 0.0 6.49526   Low
cufflinks 1.67627 0.0 5.94754   Low
cufflinks 5.23019 0.0 16.3741    
cufflinks 1.31198 0.0 4.77031   Low
cufflinks 4.68539 0.0 14.8164    

0 Strain