Gene : Phvul.007G150100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21717:SF21 - PROTEIN TRF-LIKE 8 Genomic Order:  1363
Name:  ? Phvul.007G150100 Secondary Identifier:  ? PAC:37167503
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G150100 0.5kb upstream 0.5kb upstream 10006 true Chr07: 24907890-24917895 Phaseolus vulgaris
Phvul.007G150100 0.5kb upstream 0.5kb upstream 500 false Chr07: 24907890-24908389 Phaseolus vulgaris
Phvul.007G150100 0.5kb downstream 0.5kb downstream 10006 true Chr07: 24908390-24918395 Phaseolus vulgaris
Phvul.007G150100 0.5kb downstream 0.5kb downstream 500 false Chr07: 24917896-24918395 Phaseolus vulgaris
Phvul.007G150100 1.0kb upstream 1.0kb upstream 10506 true Chr07: 24907390-24917895 Phaseolus vulgaris
Phvul.007G150100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 24907390-24908389 Phaseolus vulgaris
Phvul.007G150100 1.0kb downstream 1.0kb downstream 10506 true Chr07: 24908390-24918895 Phaseolus vulgaris
Phvul.007G150100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 24917896-24918895 Phaseolus vulgaris
Phvul.007G150100 2.0kb upstream 2.0kb upstream 11506 true Chr07: 24906390-24917895 Phaseolus vulgaris
Phvul.007G150100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 24906390-24908389 Phaseolus vulgaris
Phvul.007G150100 2.0kb downstream 2.0kb downstream 11506 true Chr07: 24908390-24919895 Phaseolus vulgaris
Phvul.007G150100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 24917896-24919895 Phaseolus vulgaris
Phvul.007G150100 5.0kb upstream 5.0kb upstream 14506 true Chr07: 24903390-24917895 Phaseolus vulgaris
Phvul.007G150100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 24903390-24908389 Phaseolus vulgaris
Phvul.007G150100 5.0kb downstream 5.0kb downstream 14506 true Chr07: 24908390-24922895 Phaseolus vulgaris
Phvul.007G150100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 24917896-24922895 Phaseolus vulgaris
Phvul.007G150100 10.0kb upstream 10.0kb upstream 19506 true Chr07: 24898390-24917895 Phaseolus vulgaris
Phvul.007G150100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 24898390-24908389 Phaseolus vulgaris
Phvul.007G150100 10.0kb downstream 10.0kb downstream 19506 true Chr07: 24908390-24927895 Phaseolus vulgaris
Phvul.007G150100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 24917896-24927895 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307792 5265 Fabidae View MSA
124070944 5270 Rosid View MSA
123748062 5271 Pentapetalae View MSA
122796480 5272 Eudicot View MSA
122050200 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121311795 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.08243 0.0 24.9147    
cufflinks 4.36995 0.0 22.9967   Low
cufflinks 13.7251 0.0 57.6523   High
cufflinks 6.42921 0.0 26.6465    
cufflinks 4.002 0.0 18.4064   Low
cufflinks 6.0998 0.0 28.0768    
cufflinks 6.91917 0.0 30.8363    
cufflinks 9.77508 0.0 39.9903   High
cufflinks 5.40329 0.0 22.467    
cufflinks 8.29718 0.0 35.397    
cufflinks 4.68347 0.0 21.383    

0 Strain