Gene : Phvul.005G006400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24193//PTHR24193:SF88 - ANKYRIN REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  60
Name:  ? Phvul.005G006400 Secondary Identifier:  ? PAC:37154384
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G006400 0.5kb upstream 0.5kb upstream 6534 true Chr05: 526506-533039 Phaseolus vulgaris
Phvul.005G006400 0.5kb upstream 0.5kb upstream 500 false Chr05: 532540-533039 Phaseolus vulgaris
Phvul.005G006400 0.5kb downstream 0.5kb downstream 6534 true Chr05: 526006-532539 Phaseolus vulgaris
Phvul.005G006400 0.5kb downstream 0.5kb downstream 500 false Chr05: 526006-526505 Phaseolus vulgaris
Phvul.005G006400 1.0kb upstream 1.0kb upstream 7034 true Chr05: 526506-533539 Phaseolus vulgaris
Phvul.005G006400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 532540-533539 Phaseolus vulgaris
Phvul.005G006400 1.0kb downstream 1.0kb downstream 7034 true Chr05: 525506-532539 Phaseolus vulgaris
Phvul.005G006400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 525506-526505 Phaseolus vulgaris
Phvul.005G006400 2.0kb upstream 2.0kb upstream 8034 true Chr05: 526506-534539 Phaseolus vulgaris
Phvul.005G006400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 532540-534539 Phaseolus vulgaris
Phvul.005G006400 2.0kb downstream 2.0kb downstream 8034 true Chr05: 524506-532539 Phaseolus vulgaris
Phvul.005G006400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 524506-526505 Phaseolus vulgaris
Phvul.005G006400 5.0kb upstream 5.0kb upstream 11034 true Chr05: 526506-537539 Phaseolus vulgaris
Phvul.005G006400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 532540-537539 Phaseolus vulgaris
Phvul.005G006400 5.0kb downstream 5.0kb downstream 11034 true Chr05: 521506-532539 Phaseolus vulgaris
Phvul.005G006400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 521506-526505 Phaseolus vulgaris
Phvul.005G006400 10.0kb upstream 10.0kb upstream 16034 true Chr05: 526506-542539 Phaseolus vulgaris
Phvul.005G006400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 532540-542539 Phaseolus vulgaris
Phvul.005G006400 10.0kb downstream 10.0kb downstream 16034 true Chr05: 516506-532539 Phaseolus vulgaris
Phvul.005G006400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 516506-526505 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314471 5265 Fabidae View MSA
124068894 5270 Rosid View MSA
123744491 5271 Pentapetalae View MSA
122791485 5272 Eudicot View MSA
122047737 5273 Angiosperm View MSA
121344886 5274 Embryophyte View MSA
123428373 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 208.837 0.0 639.485 High  
cufflinks 169.251 0.0 500.931 High  
cufflinks 289.237 0.0 936.581 High High
cufflinks 244.625 0.0 757.636 High High
cufflinks 159.949 0.0 465.616 High  
cufflinks 170.413 0.0 505.737 High  
cufflinks 112.116 0.0 315.767 High Low
cufflinks 104.194 0.0 291.3 High Low
cufflinks 147.31 0.0 428.165 High  
cufflinks 116.915 0.0 329.251 High Low
cufflinks 175.588 0.0 519.159 High  

0 Strain