Gene : Phvul.004G171500 P. vulgaris v2.1
Defline:  (1 of 1) 2.3.1.129 - Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase / UDP-N-acetylglucosamine acyltransferase Genomic Order:  1758
Name:  ? Phvul.004G171500 Secondary Identifier:  ? PAC:37162319
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris NAGLIPASYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G171500 0.5kb upstream 0.5kb upstream 4461 true Chr04: 47478239-47482699 Phaseolus vulgaris
Phvul.004G171500 0.5kb upstream 0.5kb upstream 500 false Chr04: 47482200-47482699 Phaseolus vulgaris
Phvul.004G171500 0.5kb downstream 0.5kb downstream 4461 true Chr04: 47477739-47482199 Phaseolus vulgaris
Phvul.004G171500 0.5kb downstream 0.5kb downstream 500 false Chr04: 47477739-47478238 Phaseolus vulgaris
Phvul.004G171500 1.0kb upstream 1.0kb upstream 4961 true Chr04: 47478239-47483199 Phaseolus vulgaris
Phvul.004G171500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47482200-47483199 Phaseolus vulgaris
Phvul.004G171500 1.0kb downstream 1.0kb downstream 4961 true Chr04: 47477239-47482199 Phaseolus vulgaris
Phvul.004G171500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47477239-47478238 Phaseolus vulgaris
Phvul.004G171500 2.0kb upstream 2.0kb upstream 5961 true Chr04: 47478239-47484199 Phaseolus vulgaris
Phvul.004G171500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47482200-47484199 Phaseolus vulgaris
Phvul.004G171500 2.0kb downstream 2.0kb downstream 5961 true Chr04: 47476239-47482199 Phaseolus vulgaris
Phvul.004G171500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47476239-47478238 Phaseolus vulgaris
Phvul.004G171500 5.0kb upstream 5.0kb upstream 8961 true Chr04: 47478239-47487199 Phaseolus vulgaris
Phvul.004G171500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47482200-47487199 Phaseolus vulgaris
Phvul.004G171500 5.0kb downstream 5.0kb downstream 8961 true Chr04: 47473239-47482199 Phaseolus vulgaris
Phvul.004G171500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47473239-47478238 Phaseolus vulgaris
Phvul.004G171500 10.0kb upstream 10.0kb upstream 13961 true Chr04: 47478239-47492199 Phaseolus vulgaris
Phvul.004G171500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47482200-47492199 Phaseolus vulgaris
Phvul.004G171500 10.0kb downstream 10.0kb downstream 13961 true Chr04: 47468239-47482199 Phaseolus vulgaris
Phvul.004G171500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47468239-47478238 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041125 5273 Angiosperm View MSA
122303685 5265 Fabidae View MSA
124062501 5270 Rosid View MSA
123739701 5271 Pentapetalae View MSA
122790016 5272 Eudicot View MSA
121347426 5274 Embryophyte View MSA
123380545 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.968603 0.0 6.75519   Low
cufflinks 2.55425 0.0 16.91    
cufflinks 1.84602 0.0 11.1415    
cufflinks 1.74528 0.0 10.7235    
cufflinks 1.8308 0.0 11.5917    
cufflinks 1.99677 0.0 11.7519    
cufflinks 3.0761 0.0 17.9361   High
cufflinks 2.99124 0.0 21.7041   High
cufflinks 1.62983 0.0 13.1767    
cufflinks 3.25396 0.0 22.1932   High
cufflinks 2.05719 0.0 14.7164    

0 Strain