Gene : Phvul.004G174600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33172:SF2 - EMB Genomic Order:  1789
Name:  ? Phvul.004G174600 Secondary Identifier:  ? PAC:37163808
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G174600 0.5kb upstream 0.5kb upstream 1943 true Chr04: 47707369-47709311 Phaseolus vulgaris
Phvul.004G174600 0.5kb upstream 0.5kb upstream 500 false Chr04: 47707369-47707868 Phaseolus vulgaris
Phvul.004G174600 0.5kb downstream 0.5kb downstream 1943 true Chr04: 47707869-47709811 Phaseolus vulgaris
Phvul.004G174600 0.5kb downstream 0.5kb downstream 500 false Chr04: 47709312-47709811 Phaseolus vulgaris
Phvul.004G174600 1.0kb upstream 1.0kb upstream 2443 true Chr04: 47706869-47709311 Phaseolus vulgaris
Phvul.004G174600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47706869-47707868 Phaseolus vulgaris
Phvul.004G174600 1.0kb downstream 1.0kb downstream 2443 true Chr04: 47707869-47710311 Phaseolus vulgaris
Phvul.004G174600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47709312-47710311 Phaseolus vulgaris
Phvul.004G174600 2.0kb upstream 2.0kb upstream 3443 true Chr04: 47705869-47709311 Phaseolus vulgaris
Phvul.004G174600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47705869-47707868 Phaseolus vulgaris
Phvul.004G174600 2.0kb downstream 2.0kb downstream 3443 true Chr04: 47707869-47711311 Phaseolus vulgaris
Phvul.004G174600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47709312-47711311 Phaseolus vulgaris
Phvul.004G174600 5.0kb upstream 5.0kb upstream 6443 true Chr04: 47702869-47709311 Phaseolus vulgaris
Phvul.004G174600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47702869-47707868 Phaseolus vulgaris
Phvul.004G174600 5.0kb downstream 5.0kb downstream 6443 true Chr04: 47707869-47714311 Phaseolus vulgaris
Phvul.004G174600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47709312-47714311 Phaseolus vulgaris
Phvul.004G174600 10.0kb upstream 10.0kb upstream 11443 true Chr04: 47697869-47709311 Phaseolus vulgaris
Phvul.004G174600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47697869-47707868 Phaseolus vulgaris
Phvul.004G174600 10.0kb downstream 10.0kb downstream 11443 true Chr04: 47707869-47719311 Phaseolus vulgaris
Phvul.004G174600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47709312-47719311 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311637 5265 Fabidae View MSA
124074077 5270 Rosid View MSA
123750402 5271 Pentapetalae View MSA
122795824 5272 Eudicot View MSA
122046186 5273 Angiosperm View MSA
121310570 5274 Embryophyte View MSA
123348021 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2244 0.0 50.2005   High
cufflinks 2.5921 0.0 8.81864    
cufflinks 15.174 0.0 42.3026   High
cufflinks 2.83828 0.0 9.66026    
cufflinks 2.52322 0.0 8.71826    
cufflinks 2.7596 0.0 9.31523    
cufflinks 0.24213 0.0 1.01078 Low Low
cufflinks 0.171317 0.0 0.734379 Low Low
cufflinks 4.47165 0.0 14.3433    
cufflinks 1.89119 0.0 6.67203    
cufflinks 2.49193 0.0 8.58484    

0 Strain