Gene : Phvul.004G178100 P. vulgaris v2.1
Defline:  (1 of 1) K14554 - U3 small nucleolar RNA-associated protein 21 (UTP21, WDR36) Genomic Order:  1824
Name:  ? Phvul.004G178100 Secondary Identifier:  ? PAC:37163334
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G178100 0.5kb upstream 0.5kb upstream 9769 true Chr04: 47993482-48003250 Phaseolus vulgaris
Phvul.004G178100 0.5kb upstream 0.5kb upstream 500 false Chr04: 47993482-47993981 Phaseolus vulgaris
Phvul.004G178100 0.5kb downstream 0.5kb downstream 9769 true Chr04: 47993982-48003750 Phaseolus vulgaris
Phvul.004G178100 0.5kb downstream 0.5kb downstream 500 false Chr04: 48003251-48003750 Phaseolus vulgaris
Phvul.004G178100 1.0kb upstream 1.0kb upstream 10269 true Chr04: 47992982-48003250 Phaseolus vulgaris
Phvul.004G178100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47992982-47993981 Phaseolus vulgaris
Phvul.004G178100 1.0kb downstream 1.0kb downstream 10269 true Chr04: 47993982-48004250 Phaseolus vulgaris
Phvul.004G178100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48003251-48004250 Phaseolus vulgaris
Phvul.004G178100 2.0kb upstream 2.0kb upstream 11269 true Chr04: 47991982-48003250 Phaseolus vulgaris
Phvul.004G178100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47991982-47993981 Phaseolus vulgaris
Phvul.004G178100 2.0kb downstream 2.0kb downstream 11269 true Chr04: 47993982-48005250 Phaseolus vulgaris
Phvul.004G178100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48003251-48005250 Phaseolus vulgaris
Phvul.004G178100 5.0kb upstream 5.0kb upstream 14269 true Chr04: 47988982-48003250 Phaseolus vulgaris
Phvul.004G178100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47988982-47993981 Phaseolus vulgaris
Phvul.004G178100 5.0kb downstream 5.0kb downstream 14269 true Chr04: 47993982-48008250 Phaseolus vulgaris
Phvul.004G178100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48003251-48008250 Phaseolus vulgaris
Phvul.004G178100 10.0kb upstream 10.0kb upstream 19269 true Chr04: 47983982-48003250 Phaseolus vulgaris
Phvul.004G178100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47983982-47993981 Phaseolus vulgaris
Phvul.004G178100 10.0kb downstream 10.0kb downstream 19269 true Chr04: 47993982-48013250 Phaseolus vulgaris
Phvul.004G178100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48003251-48013250 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306953 5265 Fabidae View MSA
124065336 5270 Rosid View MSA
123738219 5271 Pentapetalae View MSA
122786158 5272 Eudicot View MSA
122041805 5273 Angiosperm View MSA
121346831 5274 Embryophyte View MSA
123424252 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.48043 0.0 9.81423    
cufflinks 6.59732 0.0 17.6333   High
cufflinks 4.37048 0.0 12.0649    
cufflinks 3.14704 0.0 9.05184   Low
cufflinks 4.59687 0.0 12.7476    
cufflinks 3.06556 0.0 8.76771   Low
cufflinks 6.12359 0.0 16.4997    
cufflinks 6.87135 0.0 18.2591   High
cufflinks 7.41108 0.0 19.7124   High
cufflinks 4.82812 0.0 13.2427    
cufflinks 3.01548 0.0 8.68886   Low

0 Strain