Gene : Phvul.004G164600 P. vulgaris v2.1
Defline:  (1 of 1) 6.3.4.19 - tRNA(Ile)-lysidine synthetase / Isoleucine-specific transfer ribonucleate lysidine synthetase Genomic Order:  1689
Name:  ? Phvul.004G164600 Secondary Identifier:  ? PAC:37161715
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G164600 0.5kb upstream 0.5kb upstream 7401 true Chr04: 46874456-46881856 Phaseolus vulgaris
Phvul.004G164600 0.5kb upstream 0.5kb upstream 500 false Chr04: 46874456-46874955 Phaseolus vulgaris
Phvul.004G164600 0.5kb downstream 0.5kb downstream 7401 true Chr04: 46874956-46882356 Phaseolus vulgaris
Phvul.004G164600 0.5kb downstream 0.5kb downstream 500 false Chr04: 46881857-46882356 Phaseolus vulgaris
Phvul.004G164600 1.0kb upstream 1.0kb upstream 7901 true Chr04: 46873956-46881856 Phaseolus vulgaris
Phvul.004G164600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46873956-46874955 Phaseolus vulgaris
Phvul.004G164600 1.0kb downstream 1.0kb downstream 7901 true Chr04: 46874956-46882856 Phaseolus vulgaris
Phvul.004G164600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46881857-46882856 Phaseolus vulgaris
Phvul.004G164600 2.0kb upstream 2.0kb upstream 8901 true Chr04: 46872956-46881856 Phaseolus vulgaris
Phvul.004G164600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46872956-46874955 Phaseolus vulgaris
Phvul.004G164600 2.0kb downstream 2.0kb downstream 8901 true Chr04: 46874956-46883856 Phaseolus vulgaris
Phvul.004G164600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46881857-46883856 Phaseolus vulgaris
Phvul.004G164600 5.0kb upstream 5.0kb upstream 11901 true Chr04: 46869956-46881856 Phaseolus vulgaris
Phvul.004G164600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46869956-46874955 Phaseolus vulgaris
Phvul.004G164600 5.0kb downstream 5.0kb downstream 11901 true Chr04: 46874956-46886856 Phaseolus vulgaris
Phvul.004G164600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46881857-46886856 Phaseolus vulgaris
Phvul.004G164600 10.0kb upstream 10.0kb upstream 16901 true Chr04: 46864956-46881856 Phaseolus vulgaris
Phvul.004G164600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46864956-46874955 Phaseolus vulgaris
Phvul.004G164600 10.0kb downstream 10.0kb downstream 16901 true Chr04: 46874956-46891856 Phaseolus vulgaris
Phvul.004G164600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46881857-46891856 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026304 5273 Angiosperm View MSA
122302066 5265 Fabidae View MSA
124063792 5270 Rosid View MSA
123738903 5271 Pentapetalae View MSA
122792916 5272 Eudicot View MSA
121345916 5274 Embryophyte View MSA
123380288 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.539497 0.0 2.91302   Low
cufflinks 1.18143 0.0 15.1581    
cufflinks 2.44913 0.0 18.328   High
cufflinks 1.53668 0.0 13.6254    
cufflinks 1.64003 0.0 17.2463    
cufflinks 1.9045 0.0 18.8107    
cufflinks 1.79325 0.0 19.4637    
cufflinks 1.88622 0.0 19.6901    
cufflinks 1.73412 0.0 7.54259    
cufflinks 2.05858 0.0 19.211    
cufflinks 1.3993 0.0 6.24702    

0 Strain