Gene : Phvul.004G164800 P. vulgaris v2.1
Defline:  (1 of 1) 1.1.1.35//4.2.1.17//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  1691
Name:  ? Phvul.004G164800 Secondary Identifier:  ? PAC:37162576
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ILEUDEG-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5136 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5137 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5138 Phaseolus vulgaris pathologic  
Pvulgaris PWY-561 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6435 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6837 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7036 Phaseolus vulgaris pathologic  
Pvulgaris PWY-735 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7606 Phaseolus vulgaris pathologic  
Pvulgaris VALDEG-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G164800 0.5kb upstream 0.5kb upstream 7753 true Chr04: 46895959-46903711 Phaseolus vulgaris
Phvul.004G164800 0.5kb upstream 0.5kb upstream 500 false Chr04: 46903212-46903711 Phaseolus vulgaris
Phvul.004G164800 0.5kb downstream 0.5kb downstream 7753 true Chr04: 46895459-46903211 Phaseolus vulgaris
Phvul.004G164800 0.5kb downstream 0.5kb downstream 500 false Chr04: 46895459-46895958 Phaseolus vulgaris
Phvul.004G164800 1.0kb upstream 1.0kb upstream 8253 true Chr04: 46895959-46904211 Phaseolus vulgaris
Phvul.004G164800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46903212-46904211 Phaseolus vulgaris
Phvul.004G164800 1.0kb downstream 1.0kb downstream 8253 true Chr04: 46894959-46903211 Phaseolus vulgaris
Phvul.004G164800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46894959-46895958 Phaseolus vulgaris
Phvul.004G164800 2.0kb upstream 2.0kb upstream 9253 true Chr04: 46895959-46905211 Phaseolus vulgaris
Phvul.004G164800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46903212-46905211 Phaseolus vulgaris
Phvul.004G164800 2.0kb downstream 2.0kb downstream 9253 true Chr04: 46893959-46903211 Phaseolus vulgaris
Phvul.004G164800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46893959-46895958 Phaseolus vulgaris
Phvul.004G164800 5.0kb upstream 5.0kb upstream 12253 true Chr04: 46895959-46908211 Phaseolus vulgaris
Phvul.004G164800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46903212-46908211 Phaseolus vulgaris
Phvul.004G164800 5.0kb downstream 5.0kb downstream 12253 true Chr04: 46890959-46903211 Phaseolus vulgaris
Phvul.004G164800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46890959-46895958 Phaseolus vulgaris
Phvul.004G164800 10.0kb upstream 10.0kb upstream 17253 true Chr04: 46895959-46913211 Phaseolus vulgaris
Phvul.004G164800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46903212-46913211 Phaseolus vulgaris
Phvul.004G164800 10.0kb downstream 10.0kb downstream 17253 true Chr04: 46885959-46903211 Phaseolus vulgaris
Phvul.004G164800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46885959-46895958 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300955 5265 Fabidae View MSA
124067540 5270 Rosid View MSA
123736586 5271 Pentapetalae View MSA
122787212 5272 Eudicot View MSA
122047578 5273 Angiosperm View MSA
121310763 5274 Embryophyte View MSA
123348170 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.8101 0.0 132.763 High  
cufflinks 40.5461 0.0 108.328 High  
cufflinks 32.3386 0.0 85.126    
cufflinks 69.6156 0.0 194.317 High High
cufflinks 33.0686 0.0 86.821 High  
cufflinks 30.6563 0.0 80.4047    
cufflinks 29.9486 0.0 78.391 High  
cufflinks 23.2679 0.0 60.4139   Low
cufflinks 44.6784 0.0 119.954 High  
cufflinks 71.857 0.0 202.895 High High
cufflinks 33.4893 0.0 88.0466    

0 Strain