Gene : Phvul.004G168000 P. vulgaris v2.1
Defline:  (1 of 1) KOG3420 - Predicted RNA methylase Genomic Order:  1726
Name:  ? Phvul.004G168000 Secondary Identifier:  ? PAC:37161852
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G168000 0.5kb upstream 0.5kb upstream 5908 true Chr04: 47168083-47173990 Phaseolus vulgaris
Phvul.004G168000 0.5kb upstream 0.5kb upstream 500 false Chr04: 47168083-47168582 Phaseolus vulgaris
Phvul.004G168000 0.5kb downstream 0.5kb downstream 5908 true Chr04: 47168583-47174490 Phaseolus vulgaris
Phvul.004G168000 0.5kb downstream 0.5kb downstream 500 false Chr04: 47173991-47174490 Phaseolus vulgaris
Phvul.004G168000 1.0kb upstream 1.0kb upstream 6408 true Chr04: 47167583-47173990 Phaseolus vulgaris
Phvul.004G168000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47167583-47168582 Phaseolus vulgaris
Phvul.004G168000 1.0kb downstream 1.0kb downstream 6408 true Chr04: 47168583-47174990 Phaseolus vulgaris
Phvul.004G168000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47173991-47174990 Phaseolus vulgaris
Phvul.004G168000 2.0kb upstream 2.0kb upstream 7408 true Chr04: 47166583-47173990 Phaseolus vulgaris
Phvul.004G168000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47166583-47168582 Phaseolus vulgaris
Phvul.004G168000 2.0kb downstream 2.0kb downstream 7408 true Chr04: 47168583-47175990 Phaseolus vulgaris
Phvul.004G168000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47173991-47175990 Phaseolus vulgaris
Phvul.004G168000 5.0kb upstream 5.0kb upstream 10408 true Chr04: 47163583-47173990 Phaseolus vulgaris
Phvul.004G168000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47163583-47168582 Phaseolus vulgaris
Phvul.004G168000 5.0kb downstream 5.0kb downstream 10408 true Chr04: 47168583-47178990 Phaseolus vulgaris
Phvul.004G168000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47173991-47178990 Phaseolus vulgaris
Phvul.004G168000 10.0kb upstream 10.0kb upstream 15408 true Chr04: 47158583-47173990 Phaseolus vulgaris
Phvul.004G168000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47158583-47168582 Phaseolus vulgaris
Phvul.004G168000 10.0kb downstream 10.0kb downstream 15408 true Chr04: 47168583-47183990 Phaseolus vulgaris
Phvul.004G168000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47173991-47183990 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310330 5265 Fabidae View MSA
124063475 5270 Rosid View MSA
123737429 5271 Pentapetalae View MSA
122790972 5272 Eudicot View MSA
122044343 5273 Angiosperm View MSA
121351641 5274 Embryophyte View MSA
123425114 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.2933 0.0 25.4225   High
cufflinks 4.73863 0.0 17.5652    
cufflinks 7.89249 0.0 36.0166   High
cufflinks 6.55859 0.0 21.4427   High
cufflinks 3.45243 0.0 12.8788    
cufflinks 2.62775 0.0 12.4012   Low
cufflinks 2.60474 0.0 14.8998   Low
cufflinks 4.57598 0.0 17.0972    
cufflinks 4.11644 0.0 18.7108    
cufflinks 4.74082 0.0 18.285    
cufflinks 3.52463 0.0 18.4926    

0 Strain