Gene : Phvul.007G102800 P. vulgaris v2.1
Defline:  (1 of 3) K09287 - RAV-like factor (RAV) Genomic Order:  1037
Name:  ? Phvul.007G102800 Secondary Identifier:  ? PAC:37166674
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G102800 0.5kb upstream 0.5kb upstream 1970 true Chr07: 11791580-11793549 Phaseolus vulgaris
Phvul.007G102800 0.5kb upstream 0.5kb upstream 500 false Chr07: 11791580-11792079 Phaseolus vulgaris
Phvul.007G102800 0.5kb downstream 0.5kb downstream 1970 true Chr07: 11792080-11794049 Phaseolus vulgaris
Phvul.007G102800 0.5kb downstream 0.5kb downstream 500 false Chr07: 11793550-11794049 Phaseolus vulgaris
Phvul.007G102800 1.0kb upstream 1.0kb upstream 2470 true Chr07: 11791080-11793549 Phaseolus vulgaris
Phvul.007G102800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 11791080-11792079 Phaseolus vulgaris
Phvul.007G102800 1.0kb downstream 1.0kb downstream 2470 true Chr07: 11792080-11794549 Phaseolus vulgaris
Phvul.007G102800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 11793550-11794549 Phaseolus vulgaris
Phvul.007G102800 2.0kb upstream 2.0kb upstream 3470 true Chr07: 11790080-11793549 Phaseolus vulgaris
Phvul.007G102800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 11790080-11792079 Phaseolus vulgaris
Phvul.007G102800 2.0kb downstream 2.0kb downstream 3470 true Chr07: 11792080-11795549 Phaseolus vulgaris
Phvul.007G102800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 11793550-11795549 Phaseolus vulgaris
Phvul.007G102800 5.0kb upstream 5.0kb upstream 6470 true Chr07: 11787080-11793549 Phaseolus vulgaris
Phvul.007G102800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 11787080-11792079 Phaseolus vulgaris
Phvul.007G102800 5.0kb downstream 5.0kb downstream 6470 true Chr07: 11792080-11798549 Phaseolus vulgaris
Phvul.007G102800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 11793550-11798549 Phaseolus vulgaris
Phvul.007G102800 10.0kb upstream 10.0kb upstream 11470 true Chr07: 11782080-11793549 Phaseolus vulgaris
Phvul.007G102800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 11782080-11792079 Phaseolus vulgaris
Phvul.007G102800 10.0kb downstream 10.0kb downstream 11470 true Chr07: 11792080-11803549 Phaseolus vulgaris
Phvul.007G102800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 11793550-11803549 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296604 5265 Fabidae View MSA
124042753 5270 Rosid View MSA
123612922 5271 Pentapetalae View MSA
122647401 5272 Eudicot View MSA
122047550 5273 Angiosperm View MSA
121310758 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.72327 0.0 18.741    
cufflinks 6.99101 0.0 19.4726    
cufflinks 4.36614 0.0 12.8558    
cufflinks 1.34638 0.0 4.45469   Low
cufflinks 1.41728 0.0 4.67168   Low
cufflinks 8.26228 0.0 22.7043   High
cufflinks 6.65327 0.0 18.4585    
cufflinks 4.60261 0.0 13.362    
cufflinks 5.17448 0.0 14.7224    
cufflinks 2.51643 0.0 7.80976    
cufflinks 4.43762 0.0 12.8026    

0 Strain