Gene : Phvul.004G157500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12121:SF29 - PROTEIN ANGEL Genomic Order:  1617
Name:  ? Phvul.004G157500 Secondary Identifier:  ? PAC:37163123
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G157500 0.5kb upstream 0.5kb upstream 7416 true Chr04: 46195103-46202518 Phaseolus vulgaris
Phvul.004G157500 0.5kb upstream 0.5kb upstream 500 false Chr04: 46195103-46195602 Phaseolus vulgaris
Phvul.004G157500 0.5kb downstream 0.5kb downstream 7416 true Chr04: 46195603-46203018 Phaseolus vulgaris
Phvul.004G157500 0.5kb downstream 0.5kb downstream 500 false Chr04: 46202519-46203018 Phaseolus vulgaris
Phvul.004G157500 1.0kb upstream 1.0kb upstream 7916 true Chr04: 46194603-46202518 Phaseolus vulgaris
Phvul.004G157500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46194603-46195602 Phaseolus vulgaris
Phvul.004G157500 1.0kb downstream 1.0kb downstream 7916 true Chr04: 46195603-46203518 Phaseolus vulgaris
Phvul.004G157500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46202519-46203518 Phaseolus vulgaris
Phvul.004G157500 2.0kb upstream 2.0kb upstream 8916 true Chr04: 46193603-46202518 Phaseolus vulgaris
Phvul.004G157500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46193603-46195602 Phaseolus vulgaris
Phvul.004G157500 2.0kb downstream 2.0kb downstream 8916 true Chr04: 46195603-46204518 Phaseolus vulgaris
Phvul.004G157500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46202519-46204518 Phaseolus vulgaris
Phvul.004G157500 5.0kb upstream 5.0kb upstream 11916 true Chr04: 46190603-46202518 Phaseolus vulgaris
Phvul.004G157500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46190603-46195602 Phaseolus vulgaris
Phvul.004G157500 5.0kb downstream 5.0kb downstream 11916 true Chr04: 46195603-46207518 Phaseolus vulgaris
Phvul.004G157500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46202519-46207518 Phaseolus vulgaris
Phvul.004G157500 10.0kb upstream 10.0kb upstream 16916 true Chr04: 46185603-46202518 Phaseolus vulgaris
Phvul.004G157500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46185603-46195602 Phaseolus vulgaris
Phvul.004G157500 10.0kb downstream 10.0kb downstream 16916 true Chr04: 46195603-46212518 Phaseolus vulgaris
Phvul.004G157500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46202519-46212518 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301084 5265 Fabidae View MSA
124064139 5270 Rosid View MSA
123750146 5271 Pentapetalae View MSA
122793805 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.32055 0.0 10.6012    
cufflinks 3.06554 0.0 17.9444    
cufflinks 7.24997 0.0 31.712    
cufflinks 2.45784 0.0 8.41991    
cufflinks 1.95235 0.0 6.93079    
cufflinks 4.57426 0.0 17.1379    
cufflinks 4.303 0.0 16.8619    
cufflinks 19.3826 0.0 70.8897   High
cufflinks 2.3163 0.0 10.4323    
cufflinks 3.80003 0.0 11.9353    
cufflinks 1.97591 0.0 11.1957    

0 Strain