Gene : Phvul.007G108900 P. vulgaris v2.1
Defline:  (1 of 2) K12119 - cryptochrome 2 (CRY2) Genomic Order:  1099
Name:  ? Phvul.007G108900 Secondary Identifier:  ? PAC:37166482
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G108900 0.5kb upstream 0.5kb upstream 6471 true Chr07: 13866327-13872797 Phaseolus vulgaris
Phvul.007G108900 0.5kb upstream 0.5kb upstream 500 false Chr07: 13866327-13866826 Phaseolus vulgaris
Phvul.007G108900 0.5kb downstream 0.5kb downstream 6471 true Chr07: 13866827-13873297 Phaseolus vulgaris
Phvul.007G108900 0.5kb downstream 0.5kb downstream 500 false Chr07: 13872798-13873297 Phaseolus vulgaris
Phvul.007G108900 1.0kb upstream 1.0kb upstream 6971 true Chr07: 13865827-13872797 Phaseolus vulgaris
Phvul.007G108900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 13865827-13866826 Phaseolus vulgaris
Phvul.007G108900 1.0kb downstream 1.0kb downstream 6971 true Chr07: 13866827-13873797 Phaseolus vulgaris
Phvul.007G108900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 13872798-13873797 Phaseolus vulgaris
Phvul.007G108900 2.0kb upstream 2.0kb upstream 7971 true Chr07: 13864827-13872797 Phaseolus vulgaris
Phvul.007G108900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 13864827-13866826 Phaseolus vulgaris
Phvul.007G108900 2.0kb downstream 2.0kb downstream 7971 true Chr07: 13866827-13874797 Phaseolus vulgaris
Phvul.007G108900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 13872798-13874797 Phaseolus vulgaris
Phvul.007G108900 5.0kb upstream 5.0kb upstream 10971 true Chr07: 13861827-13872797 Phaseolus vulgaris
Phvul.007G108900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 13861827-13866826 Phaseolus vulgaris
Phvul.007G108900 5.0kb downstream 5.0kb downstream 10971 true Chr07: 13866827-13877797 Phaseolus vulgaris
Phvul.007G108900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 13872798-13877797 Phaseolus vulgaris
Phvul.007G108900 10.0kb upstream 10.0kb upstream 15971 true Chr07: 13856827-13872797 Phaseolus vulgaris
Phvul.007G108900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 13856827-13866826 Phaseolus vulgaris
Phvul.007G108900 10.0kb downstream 10.0kb downstream 15971 true Chr07: 13866827-13882797 Phaseolus vulgaris
Phvul.007G108900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 13872798-13882797 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306524 5265 Fabidae View MSA
124066295 5270 Rosid View MSA
123738147 5271 Pentapetalae View MSA
122792892 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.5263 0.0 204.936 High  
cufflinks 57.0174 0.0 190.659 High  
cufflinks 98.8268 0.0 395.499 High High
cufflinks 24.7023 0.0 80.4939   Low
cufflinks 76.3453 0.0 271.932 High  
cufflinks 57.9959 0.0 197.415 High  
cufflinks 44.9482 0.0 143.295 High  
cufflinks 33.4419 0.0 104.591 High Low
cufflinks 47.1352 0.0 151.593 High  
cufflinks 131.096 0.0 570.606 High High
cufflinks 63.8138 0.0 217.21 High  

0 Strain