Gene : Phvul.007G242700 P. vulgaris v2.1
Defline:  (1 of 1) KOG4495 - RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin B Genomic Order:  2282
Name:  ? Phvul.007G242700 Secondary Identifier:  ? PAC:37167144
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G242700 0.5kb upstream 0.5kb upstream 5067 true Chr07: 36591622-36596688 Phaseolus vulgaris
Phvul.007G242700 0.5kb upstream 0.5kb upstream 500 false Chr07: 36591622-36592121 Phaseolus vulgaris
Phvul.007G242700 0.5kb downstream 0.5kb downstream 5067 true Chr07: 36592122-36597188 Phaseolus vulgaris
Phvul.007G242700 0.5kb downstream 0.5kb downstream 500 false Chr07: 36596689-36597188 Phaseolus vulgaris
Phvul.007G242700 1.0kb upstream 1.0kb upstream 5567 true Chr07: 36591122-36596688 Phaseolus vulgaris
Phvul.007G242700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36591122-36592121 Phaseolus vulgaris
Phvul.007G242700 1.0kb downstream 1.0kb downstream 5567 true Chr07: 36592122-36597688 Phaseolus vulgaris
Phvul.007G242700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36596689-36597688 Phaseolus vulgaris
Phvul.007G242700 2.0kb upstream 2.0kb upstream 6567 true Chr07: 36590122-36596688 Phaseolus vulgaris
Phvul.007G242700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36590122-36592121 Phaseolus vulgaris
Phvul.007G242700 2.0kb downstream 2.0kb downstream 6567 true Chr07: 36592122-36598688 Phaseolus vulgaris
Phvul.007G242700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36596689-36598688 Phaseolus vulgaris
Phvul.007G242700 5.0kb upstream 5.0kb upstream 9567 true Chr07: 36587122-36596688 Phaseolus vulgaris
Phvul.007G242700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36587122-36592121 Phaseolus vulgaris
Phvul.007G242700 5.0kb downstream 5.0kb downstream 9567 true Chr07: 36592122-36601688 Phaseolus vulgaris
Phvul.007G242700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36596689-36601688 Phaseolus vulgaris
Phvul.007G242700 10.0kb upstream 10.0kb upstream 14567 true Chr07: 36582122-36596688 Phaseolus vulgaris
Phvul.007G242700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36582122-36592121 Phaseolus vulgaris
Phvul.007G242700 10.0kb downstream 10.0kb downstream 14567 true Chr07: 36592122-36606688 Phaseolus vulgaris
Phvul.007G242700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36596689-36606688 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041259 5273 Angiosperm View MSA
122299731 5265 Fabidae View MSA
124069900 5270 Rosid View MSA
123745453 5271 Pentapetalae View MSA
122793861 5272 Eudicot View MSA
121350685 5274 Embryophyte View MSA
123425021 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6221 0.0 34.1517   High
cufflinks 7.14667 0.0 22.2662    
cufflinks 6.21807 0.0 19.6472    
cufflinks 10.6787 0.0 31.9494   High
cufflinks 5.00196 0.0 16.371    
cufflinks 5.75099 0.0 18.3579    
cufflinks 6.17658 0.0 19.6098    
cufflinks 7.60553 0.0 23.3895    
cufflinks 4.24308 0.0 14.0773   Low
cufflinks 3.64247 0.0 12.2554   Low
cufflinks 5.30881 0.0 17.2206    

0 Strain