Gene : Phvul.005G091000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR23042:SF67 - TRANSCRIPTION FACTOR ILR3-RELATED Genomic Order:  882
Name:  ? Phvul.005G091000 Secondary Identifier:  ? PAC:37152430
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G091000 0.5kb upstream 0.5kb upstream 2953 true Chr05: 25631942-25634894 Phaseolus vulgaris
Phvul.005G091000 0.5kb upstream 0.5kb upstream 500 false Chr05: 25631942-25632441 Phaseolus vulgaris
Phvul.005G091000 0.5kb downstream 0.5kb downstream 2953 true Chr05: 25632442-25635394 Phaseolus vulgaris
Phvul.005G091000 0.5kb downstream 0.5kb downstream 500 false Chr05: 25634895-25635394 Phaseolus vulgaris
Phvul.005G091000 1.0kb upstream 1.0kb upstream 3453 true Chr05: 25631442-25634894 Phaseolus vulgaris
Phvul.005G091000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 25631442-25632441 Phaseolus vulgaris
Phvul.005G091000 1.0kb downstream 1.0kb downstream 3453 true Chr05: 25632442-25635894 Phaseolus vulgaris
Phvul.005G091000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 25634895-25635894 Phaseolus vulgaris
Phvul.005G091000 2.0kb upstream 2.0kb upstream 4453 true Chr05: 25630442-25634894 Phaseolus vulgaris
Phvul.005G091000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 25630442-25632441 Phaseolus vulgaris
Phvul.005G091000 2.0kb downstream 2.0kb downstream 4453 true Chr05: 25632442-25636894 Phaseolus vulgaris
Phvul.005G091000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 25634895-25636894 Phaseolus vulgaris
Phvul.005G091000 5.0kb upstream 5.0kb upstream 7453 true Chr05: 25627442-25634894 Phaseolus vulgaris
Phvul.005G091000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 25627442-25632441 Phaseolus vulgaris
Phvul.005G091000 5.0kb downstream 5.0kb downstream 7453 true Chr05: 25632442-25639894 Phaseolus vulgaris
Phvul.005G091000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 25634895-25639894 Phaseolus vulgaris
Phvul.005G091000 10.0kb upstream 10.0kb upstream 12453 true Chr05: 25622442-25634894 Phaseolus vulgaris
Phvul.005G091000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 25622442-25632441 Phaseolus vulgaris
Phvul.005G091000 10.0kb downstream 10.0kb downstream 12453 true Chr05: 25632442-25644894 Phaseolus vulgaris
Phvul.005G091000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 25634895-25644894 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297738 5265 Fabidae View MSA
124066485 5270 Rosid View MSA
123741763 5271 Pentapetalae View MSA
122797303 5272 Eudicot View MSA
122049965 5273 Angiosperm View MSA
121349797 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.8404 0.0 39.6143    
cufflinks 14.9907 0.0 40.1758    
cufflinks 48.1143 0.0 124.901 High High
cufflinks 18.469 0.0 48.7483    
cufflinks 42.2695 0.0 109.391 High High
cufflinks 30.3299 0.0 78.5008    
cufflinks 17.8223 0.0 46.9678    
cufflinks 13.6377 0.0 36.5994    
cufflinks 18.1474 0.0 47.8925    
cufflinks 11.8482 0.0 32.3708   Low
cufflinks 45.7053 0.0 118.412 High High

0 Strain