Gene : Phvul.005G082500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31942:SF15 - MLO-LIKE PROTEIN 11-RELATED Genomic Order:  825
Name:  ? Phvul.005G082500 Secondary Identifier:  ? PAC:37152679
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G082500 0.5kb upstream 0.5kb upstream 16967 true Chr05: 21388806-21405772 Phaseolus vulgaris
Phvul.005G082500 0.5kb upstream 0.5kb upstream 500 false Chr05: 21405273-21405772 Phaseolus vulgaris
Phvul.005G082500 0.5kb downstream 0.5kb downstream 16967 true Chr05: 21388306-21405272 Phaseolus vulgaris
Phvul.005G082500 0.5kb downstream 0.5kb downstream 500 false Chr05: 21388306-21388805 Phaseolus vulgaris
Phvul.005G082500 1.0kb upstream 1.0kb upstream 17467 true Chr05: 21388806-21406272 Phaseolus vulgaris
Phvul.005G082500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21405273-21406272 Phaseolus vulgaris
Phvul.005G082500 1.0kb downstream 1.0kb downstream 17467 true Chr05: 21387806-21405272 Phaseolus vulgaris
Phvul.005G082500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21387806-21388805 Phaseolus vulgaris
Phvul.005G082500 2.0kb upstream 2.0kb upstream 18467 true Chr05: 21388806-21407272 Phaseolus vulgaris
Phvul.005G082500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21405273-21407272 Phaseolus vulgaris
Phvul.005G082500 2.0kb downstream 2.0kb downstream 18467 true Chr05: 21386806-21405272 Phaseolus vulgaris
Phvul.005G082500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21386806-21388805 Phaseolus vulgaris
Phvul.005G082500 5.0kb upstream 5.0kb upstream 21467 true Chr05: 21388806-21410272 Phaseolus vulgaris
Phvul.005G082500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21405273-21410272 Phaseolus vulgaris
Phvul.005G082500 5.0kb downstream 5.0kb downstream 21467 true Chr05: 21383806-21405272 Phaseolus vulgaris
Phvul.005G082500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21383806-21388805 Phaseolus vulgaris
Phvul.005G082500 10.0kb upstream 10.0kb upstream 26467 true Chr05: 21388806-21415272 Phaseolus vulgaris
Phvul.005G082500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21405273-21415272 Phaseolus vulgaris
Phvul.005G082500 10.0kb downstream 10.0kb downstream 26467 true Chr05: 21378806-21405272 Phaseolus vulgaris
Phvul.005G082500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21378806-21388805 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302883 5265 Fabidae View MSA
124061204 5270 Rosid View MSA
123749822 5271 Pentapetalae View MSA
122795258 5272 Eudicot View MSA
122048156 5273 Angiosperm View MSA
121351201 5274 Embryophyte View MSA
123428182 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.445573 0.0 3.4708   Low
cufflinks 0.567901 0.0 3.93671   Low
cufflinks 1.80319 0.0 9.53541    
cufflinks 0.933473 0.0 6.32684    
cufflinks 0.490537 0.0 4.59891 Low Low
cufflinks 2.36897 0.0 11.643   High
cufflinks 1.5191 0.0 9.33318    
cufflinks 2.32829 0.0 12.4633   High
cufflinks 0.82539 0.0 5.29799    
cufflinks 1.33394 0.0 7.32097    
cufflinks 0.880764 0.0 5.44373    

0 Strain