Gene : Phvul.005G082401 P. vulgaris v2.1
Defline:  (1 of 2) K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Genomic Order:  824
Name:  ? Phvul.005G082401 Secondary Identifier:  ? PAC:37153258
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G082401 0.5kb upstream 0.5kb upstream 23128 true Chr05: 21341143-21364270 Phaseolus vulgaris
Phvul.005G082401 0.5kb upstream 0.5kb upstream 500 false Chr05: 21341143-21341642 Phaseolus vulgaris
Phvul.005G082401 0.5kb downstream 0.5kb downstream 23128 true Chr05: 21341643-21364770 Phaseolus vulgaris
Phvul.005G082401 0.5kb downstream 0.5kb downstream 500 false Chr05: 21364271-21364770 Phaseolus vulgaris
Phvul.005G082401 1.0kb upstream 1.0kb upstream 23628 true Chr05: 21340643-21364270 Phaseolus vulgaris
Phvul.005G082401 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21340643-21341642 Phaseolus vulgaris
Phvul.005G082401 1.0kb downstream 1.0kb downstream 23628 true Chr05: 21341643-21365270 Phaseolus vulgaris
Phvul.005G082401 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21364271-21365270 Phaseolus vulgaris
Phvul.005G082401 2.0kb upstream 2.0kb upstream 24628 true Chr05: 21339643-21364270 Phaseolus vulgaris
Phvul.005G082401 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21339643-21341642 Phaseolus vulgaris
Phvul.005G082401 2.0kb downstream 2.0kb downstream 24628 true Chr05: 21341643-21366270 Phaseolus vulgaris
Phvul.005G082401 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21364271-21366270 Phaseolus vulgaris
Phvul.005G082401 5.0kb upstream 5.0kb upstream 27628 true Chr05: 21336643-21364270 Phaseolus vulgaris
Phvul.005G082401 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21336643-21341642 Phaseolus vulgaris
Phvul.005G082401 5.0kb downstream 5.0kb downstream 27628 true Chr05: 21341643-21369270 Phaseolus vulgaris
Phvul.005G082401 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21364271-21369270 Phaseolus vulgaris
Phvul.005G082401 10.0kb upstream 10.0kb upstream 32628 true Chr05: 21331643-21364270 Phaseolus vulgaris
Phvul.005G082401 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21331643-21341642 Phaseolus vulgaris
Phvul.005G082401 10.0kb downstream 10.0kb downstream 32628 true Chr05: 21341643-21374270 Phaseolus vulgaris
Phvul.005G082401 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21364271-21374270 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297015 5265 Fabidae View MSA
124068614 5270 Rosid View MSA
123746416 5271 Pentapetalae View MSA
122790584 5272 Eudicot View MSA
122045224 5273 Angiosperm View MSA
121347248 5274 Embryophyte View MSA
123428295 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.21387 0.0 20.5805    
cufflinks 8.64916 0.0 27.0759    
cufflinks 11.3398 0.0 33.5636   High
cufflinks 6.3355 0.0 21.6756    
cufflinks 7.82425 0.0 28.3108    
cufflinks 8.28009 0.0 25.3605    
cufflinks 4.63612 0.0 22.0785   Low
cufflinks 5.76109 0.0 22.1555    
cufflinks 5.38768 0.0 18.2433    
cufflinks 10.9597 0.0 45.932   High
cufflinks 6.15147 0.0 20.493    

0 Strain