Gene : Phvul.007G232200 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10693:SF29 - GB Genomic Order:  2179
Name:  ? Phvul.007G232200 Secondary Identifier:  ? PAC:37166144
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G232200 0.5kb upstream 0.5kb upstream 7402 true Chr07: 35575250-35582651 Phaseolus vulgaris
Phvul.007G232200 0.5kb upstream 0.5kb upstream 500 false Chr07: 35582152-35582651 Phaseolus vulgaris
Phvul.007G232200 0.5kb downstream 0.5kb downstream 7402 true Chr07: 35574750-35582151 Phaseolus vulgaris
Phvul.007G232200 0.5kb downstream 0.5kb downstream 500 false Chr07: 35574750-35575249 Phaseolus vulgaris
Phvul.007G232200 1.0kb upstream 1.0kb upstream 7902 true Chr07: 35575250-35583151 Phaseolus vulgaris
Phvul.007G232200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35582152-35583151 Phaseolus vulgaris
Phvul.007G232200 1.0kb downstream 1.0kb downstream 7902 true Chr07: 35574250-35582151 Phaseolus vulgaris
Phvul.007G232200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35574250-35575249 Phaseolus vulgaris
Phvul.007G232200 2.0kb upstream 2.0kb upstream 8902 true Chr07: 35575250-35584151 Phaseolus vulgaris
Phvul.007G232200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35582152-35584151 Phaseolus vulgaris
Phvul.007G232200 2.0kb downstream 2.0kb downstream 8902 true Chr07: 35573250-35582151 Phaseolus vulgaris
Phvul.007G232200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35573250-35575249 Phaseolus vulgaris
Phvul.007G232200 5.0kb upstream 5.0kb upstream 11902 true Chr07: 35575250-35587151 Phaseolus vulgaris
Phvul.007G232200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35582152-35587151 Phaseolus vulgaris
Phvul.007G232200 5.0kb downstream 5.0kb downstream 11902 true Chr07: 35570250-35582151 Phaseolus vulgaris
Phvul.007G232200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35570250-35575249 Phaseolus vulgaris
Phvul.007G232200 10.0kb upstream 10.0kb upstream 16902 true Chr07: 35575250-35592151 Phaseolus vulgaris
Phvul.007G232200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35582152-35592151 Phaseolus vulgaris
Phvul.007G232200 10.0kb downstream 10.0kb downstream 16902 true Chr07: 35565250-35582151 Phaseolus vulgaris
Phvul.007G232200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35565250-35575249 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302299 5265 Fabidae View MSA
124070794 5270 Rosid View MSA
123747329 5271 Pentapetalae View MSA
122793510 5272 Eudicot View MSA
122050704 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.97924 0.0 21.6839   Low
cufflinks 13.2443 0.0 34.7088   High
cufflinks 9.39903 0.0 25.1481    
cufflinks 9.90914 0.0 26.5569    
cufflinks 9.53368 0.0 25.6583    
cufflinks 10.1845 0.0 27.1198    
cufflinks 12.6825 0.0 33.2301   High
cufflinks 14.9363 0.0 38.8258   High
cufflinks 9.8824 0.0 26.3447    
cufflinks 7.72874 0.0 21.0867   Low
cufflinks 10.14 0.0 27.1027    

0 Strain