Gene : Phvul.005G088900 P. vulgaris v2.1
Defline:  (1 of 11) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA) Genomic Order:  886
Name:  ? Phvul.005G088900 Secondary Identifier:  ? PAC:37153046
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7279 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G088900 0.5kb upstream 0.5kb upstream 4586 true Chr05: 25938335-25942920 Phaseolus vulgaris
Phvul.005G088900 0.5kb upstream 0.5kb upstream 500 false Chr05: 25942421-25942920 Phaseolus vulgaris
Phvul.005G088900 0.5kb downstream 0.5kb downstream 4586 true Chr05: 25937835-25942420 Phaseolus vulgaris
Phvul.005G088900 0.5kb downstream 0.5kb downstream 500 false Chr05: 25937835-25938334 Phaseolus vulgaris
Phvul.005G088900 1.0kb upstream 1.0kb upstream 5086 true Chr05: 25938335-25943420 Phaseolus vulgaris
Phvul.005G088900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 25942421-25943420 Phaseolus vulgaris
Phvul.005G088900 1.0kb downstream 1.0kb downstream 5086 true Chr05: 25937335-25942420 Phaseolus vulgaris
Phvul.005G088900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 25937335-25938334 Phaseolus vulgaris
Phvul.005G088900 2.0kb upstream 2.0kb upstream 6086 true Chr05: 25938335-25944420 Phaseolus vulgaris
Phvul.005G088900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 25942421-25944420 Phaseolus vulgaris
Phvul.005G088900 2.0kb downstream 2.0kb downstream 6086 true Chr05: 25936335-25942420 Phaseolus vulgaris
Phvul.005G088900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 25936335-25938334 Phaseolus vulgaris
Phvul.005G088900 5.0kb upstream 5.0kb upstream 9086 true Chr05: 25938335-25947420 Phaseolus vulgaris
Phvul.005G088900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 25942421-25947420 Phaseolus vulgaris
Phvul.005G088900 5.0kb downstream 5.0kb downstream 9086 true Chr05: 25933335-25942420 Phaseolus vulgaris
Phvul.005G088900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 25933335-25938334 Phaseolus vulgaris
Phvul.005G088900 10.0kb upstream 10.0kb upstream 14086 true Chr05: 25938335-25952420 Phaseolus vulgaris
Phvul.005G088900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 25942421-25952420 Phaseolus vulgaris
Phvul.005G088900 10.0kb downstream 10.0kb downstream 14086 true Chr05: 25928335-25942420 Phaseolus vulgaris
Phvul.005G088900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 25928335-25938334 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299131 5265 Fabidae View MSA
124066507 5270 Rosid View MSA
123752194 5271 Pentapetalae View MSA
122789717 5272 Eudicot View MSA
122045410 5273 Angiosperm View MSA
121349391 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.6086 0.0 227.02 High  
cufflinks 54.658 0.0 171.511 High  
cufflinks 42.7435 0.0 134.663 High Low
cufflinks 73.2902 0.0 233.658 High  
cufflinks 120.915 0.0 410.968 High High
cufflinks 61.6187 0.0 194.491 High  
cufflinks 91.4568 0.0 300.941 High  
cufflinks 44.8891 0.0 140.685 High Low
cufflinks 96.4616 0.0 321.724 High  
cufflinks 50.5853 0.0 157.875 High  
cufflinks 184.831 0.0 692.927 High High

0 Strain