Gene : Phvul.005G087318 P. vulgaris v2.1
Defline:  (1 of 13) PF12609 - Wound-induced protein (DUF3774) Genomic Order:  907
Name:  ? Phvul.005G087318 Secondary Identifier:  ? PAC:37152309
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G087318 0.5kb upstream 0.5kb upstream 1016 true Chr05: 27064442-27065457 Phaseolus vulgaris
Phvul.005G087318 0.5kb upstream 0.5kb upstream 500 false Chr05: 27064442-27064941 Phaseolus vulgaris
Phvul.005G087318 0.5kb downstream 0.5kb downstream 1016 true Chr05: 27064942-27065957 Phaseolus vulgaris
Phvul.005G087318 0.5kb downstream 0.5kb downstream 500 false Chr05: 27065458-27065957 Phaseolus vulgaris
Phvul.005G087318 1.0kb upstream 1.0kb upstream 1516 true Chr05: 27063942-27065457 Phaseolus vulgaris
Phvul.005G087318 1.0kb upstream 1.0kb upstream 1000 false Chr05: 27063942-27064941 Phaseolus vulgaris
Phvul.005G087318 1.0kb downstream 1.0kb downstream 1516 true Chr05: 27064942-27066457 Phaseolus vulgaris
Phvul.005G087318 1.0kb downstream 1.0kb downstream 1000 false Chr05: 27065458-27066457 Phaseolus vulgaris
Phvul.005G087318 2.0kb upstream 2.0kb upstream 2516 true Chr05: 27062942-27065457 Phaseolus vulgaris
Phvul.005G087318 2.0kb upstream 2.0kb upstream 2000 false Chr05: 27062942-27064941 Phaseolus vulgaris
Phvul.005G087318 2.0kb downstream 2.0kb downstream 2516 true Chr05: 27064942-27067457 Phaseolus vulgaris
Phvul.005G087318 2.0kb downstream 2.0kb downstream 2000 false Chr05: 27065458-27067457 Phaseolus vulgaris
Phvul.005G087318 5.0kb upstream 5.0kb upstream 5516 true Chr05: 27059942-27065457 Phaseolus vulgaris
Phvul.005G087318 5.0kb upstream 5.0kb upstream 5000 false Chr05: 27059942-27064941 Phaseolus vulgaris
Phvul.005G087318 5.0kb downstream 5.0kb downstream 5516 true Chr05: 27064942-27070457 Phaseolus vulgaris
Phvul.005G087318 5.0kb downstream 5.0kb downstream 5000 false Chr05: 27065458-27070457 Phaseolus vulgaris
Phvul.005G087318 10.0kb upstream 10.0kb upstream 10516 true Chr05: 27054942-27065457 Phaseolus vulgaris
Phvul.005G087318 10.0kb upstream 10.0kb upstream 10000 false Chr05: 27054942-27064941 Phaseolus vulgaris
Phvul.005G087318 10.0kb downstream 10.0kb downstream 10516 true Chr05: 27064942-27075457 Phaseolus vulgaris
Phvul.005G087318 10.0kb downstream 10.0kb downstream 10000 false Chr05: 27065458-27075457 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305787 5265 Fabidae View MSA
124074460 5270 Rosid View MSA
123752269 5271 Pentapetalae View MSA
122786865 5272 Eudicot View MSA
122051043 5273 Angiosperm View MSA
121312265 5274 Embryophyte View MSA
123349454 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.07079 0.0 26.4694    
cufflinks 10.0468 0.0 31.89    
cufflinks 1.42945 0.0 5.49708   Low
cufflinks 25.3463 0.0 72.64    
cufflinks 9.88246 0.0 31.5658    
cufflinks 2.01802 0.0 7.55335   Low
cufflinks 16.0477 0.0 48.1063    
cufflinks 53.8243 0.0 144.106 High High
cufflinks 9.20537 0.0 29.3328    
cufflinks 19.7404 0.0 58.2005    
cufflinks 16.2633 0.0 48.8406    

0 Strain