Gene : Phvul.007G219200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12899//PTHR12899:SF4 - 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL // SUBFAMILY NOT NAMED Genomic Order:  2050
Name:  ? Phvul.007G219200 Secondary Identifier:  ? PAC:37165596
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G219200 0.5kb upstream 0.5kb upstream 863 true Chr07: 34251964-34252826 Phaseolus vulgaris
Phvul.007G219200 0.5kb upstream 0.5kb upstream 500 false Chr07: 34252327-34252826 Phaseolus vulgaris
Phvul.007G219200 0.5kb downstream 0.5kb downstream 863 true Chr07: 34251464-34252326 Phaseolus vulgaris
Phvul.007G219200 0.5kb downstream 0.5kb downstream 500 false Chr07: 34251464-34251963 Phaseolus vulgaris
Phvul.007G219200 1.0kb upstream 1.0kb upstream 1363 true Chr07: 34251964-34253326 Phaseolus vulgaris
Phvul.007G219200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34252327-34253326 Phaseolus vulgaris
Phvul.007G219200 1.0kb downstream 1.0kb downstream 1363 true Chr07: 34250964-34252326 Phaseolus vulgaris
Phvul.007G219200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34250964-34251963 Phaseolus vulgaris
Phvul.007G219200 2.0kb upstream 2.0kb upstream 2363 true Chr07: 34251964-34254326 Phaseolus vulgaris
Phvul.007G219200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34252327-34254326 Phaseolus vulgaris
Phvul.007G219200 2.0kb downstream 2.0kb downstream 2363 true Chr07: 34249964-34252326 Phaseolus vulgaris
Phvul.007G219200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34249964-34251963 Phaseolus vulgaris
Phvul.007G219200 5.0kb upstream 5.0kb upstream 5363 true Chr07: 34251964-34257326 Phaseolus vulgaris
Phvul.007G219200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34252327-34257326 Phaseolus vulgaris
Phvul.007G219200 5.0kb downstream 5.0kb downstream 5363 true Chr07: 34246964-34252326 Phaseolus vulgaris
Phvul.007G219200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34246964-34251963 Phaseolus vulgaris
Phvul.007G219200 10.0kb upstream 10.0kb upstream 10363 true Chr07: 34251964-34262326 Phaseolus vulgaris
Phvul.007G219200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34252327-34262326 Phaseolus vulgaris
Phvul.007G219200 10.0kb downstream 10.0kb downstream 10363 true Chr07: 34241964-34252326 Phaseolus vulgaris
Phvul.007G219200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34241964-34251963 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309171 5265 Fabidae View MSA
124065867 5270 Rosid View MSA
123736838 5271 Pentapetalae View MSA
122788352 5272 Eudicot View MSA
122047564 5273 Angiosperm View MSA
121310762 5274 Embryophyte View MSA
123348169 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.306877 0.0 8.08307 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain