Gene : Phvul.007G226700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR24098:SF5 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  2125
Name:  ? Phvul.007G226700 Secondary Identifier:  ? PAC:37165240
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G226700 0.5kb upstream 0.5kb upstream 11972 true Chr07: 35011839-35023810 Phaseolus vulgaris
Phvul.007G226700 0.5kb upstream 0.5kb upstream 500 false Chr07: 35011839-35012338 Phaseolus vulgaris
Phvul.007G226700 0.5kb downstream 0.5kb downstream 11972 true Chr07: 35012339-35024310 Phaseolus vulgaris
Phvul.007G226700 0.5kb downstream 0.5kb downstream 500 false Chr07: 35023811-35024310 Phaseolus vulgaris
Phvul.007G226700 1.0kb upstream 1.0kb upstream 12472 true Chr07: 35011339-35023810 Phaseolus vulgaris
Phvul.007G226700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35011339-35012338 Phaseolus vulgaris
Phvul.007G226700 1.0kb downstream 1.0kb downstream 12472 true Chr07: 35012339-35024810 Phaseolus vulgaris
Phvul.007G226700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35023811-35024810 Phaseolus vulgaris
Phvul.007G226700 2.0kb upstream 2.0kb upstream 13472 true Chr07: 35010339-35023810 Phaseolus vulgaris
Phvul.007G226700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35010339-35012338 Phaseolus vulgaris
Phvul.007G226700 2.0kb downstream 2.0kb downstream 13472 true Chr07: 35012339-35025810 Phaseolus vulgaris
Phvul.007G226700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35023811-35025810 Phaseolus vulgaris
Phvul.007G226700 5.0kb upstream 5.0kb upstream 16472 true Chr07: 35007339-35023810 Phaseolus vulgaris
Phvul.007G226700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35007339-35012338 Phaseolus vulgaris
Phvul.007G226700 5.0kb downstream 5.0kb downstream 16472 true Chr07: 35012339-35028810 Phaseolus vulgaris
Phvul.007G226700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35023811-35028810 Phaseolus vulgaris
Phvul.007G226700 10.0kb upstream 10.0kb upstream 21472 true Chr07: 35002339-35023810 Phaseolus vulgaris
Phvul.007G226700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35002339-35012338 Phaseolus vulgaris
Phvul.007G226700 10.0kb downstream 10.0kb downstream 21472 true Chr07: 35012339-35033810 Phaseolus vulgaris
Phvul.007G226700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35023811-35033810 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296901 5265 Fabidae View MSA
124068240 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.43671 0.0 17.1426    
cufflinks 10.9349 0.0 28.3928    
cufflinks 12.9702 0.0 33.5487   High
cufflinks 5.18018 0.0 14.1254   Low
cufflinks 10.0587 0.0 26.1995    
cufflinks 12.2426 0.0 31.7025   High
cufflinks 8.34173 0.0 21.881    
cufflinks 6.95988 0.0 18.4289    
cufflinks 6.52808 0.0 17.4387    
cufflinks 12.2722 0.0 31.7857   High
cufflinks 8.09159 0.0 21.328    

0 Strain