Gene : Phvul.007G215400 P. vulgaris v2.1

Defline:  (1 of 1) PTHR23241//PTHR23241:SF55 - LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2008
Name:  ? Phvul.007G215400 Secondary Identifier:  ? PAC:37165773

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G215400 0.5kb upstream 0.5kb upstream 2775 true Chr07: 33811860-33814634 Phaseolus vulgaris
Phvul.007G215400 0.5kb upstream 0.5kb upstream 500 false Chr07: 33811860-33812359 Phaseolus vulgaris
Phvul.007G215400 0.5kb downstream 0.5kb downstream 2775 true Chr07: 33812360-33815134 Phaseolus vulgaris
Phvul.007G215400 0.5kb downstream 0.5kb downstream 500 false Chr07: 33814635-33815134 Phaseolus vulgaris
Phvul.007G215400 1.0kb upstream 1.0kb upstream 3275 true Chr07: 33811360-33814634 Phaseolus vulgaris
Phvul.007G215400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 33811360-33812359 Phaseolus vulgaris
Phvul.007G215400 1.0kb downstream 1.0kb downstream 3275 true Chr07: 33812360-33815634 Phaseolus vulgaris
Phvul.007G215400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 33814635-33815634 Phaseolus vulgaris
Phvul.007G215400 2.0kb upstream 2.0kb upstream 4275 true Chr07: 33810360-33814634 Phaseolus vulgaris
Phvul.007G215400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 33810360-33812359 Phaseolus vulgaris
Phvul.007G215400 2.0kb downstream 2.0kb downstream 4275 true Chr07: 33812360-33816634 Phaseolus vulgaris
Phvul.007G215400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 33814635-33816634 Phaseolus vulgaris
Phvul.007G215400 5.0kb upstream 5.0kb upstream 7275 true Chr07: 33807360-33814634 Phaseolus vulgaris
Phvul.007G215400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 33807360-33812359 Phaseolus vulgaris
Phvul.007G215400 5.0kb downstream 5.0kb downstream 7275 true Chr07: 33812360-33819634 Phaseolus vulgaris
Phvul.007G215400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 33814635-33819634 Phaseolus vulgaris
Phvul.007G215400 10.0kb upstream 10.0kb upstream 12275 true Chr07: 33802360-33814634 Phaseolus vulgaris
Phvul.007G215400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 33802360-33812359 Phaseolus vulgaris
Phvul.007G215400 10.0kb downstream 10.0kb downstream 12275 true Chr07: 33812360-33824634 Phaseolus vulgaris
Phvul.007G215400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 33814635-33824634 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301022 5265 Fabidae View MSA
124065364 5270 Rosid View MSA
123740028 5271 Pentapetalae View MSA
122787997 5272 Eudicot View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.3423 0.0 196.359 High  
cufflinks 74.543 0.0 213.252 High  
cufflinks 30.0122 0.0 85.5682   Low
cufflinks 235.859 0.0 804.464 High High
cufflinks 48.673 0.0 136.918 High  
cufflinks 41.1244 0.0 125.117 High  
cufflinks 39.4868 0.0 119.388 High  
cufflinks 101.321 0.0 304.588 High  
cufflinks 52.2996 0.0 170.904 High  
cufflinks 102.402 0.0 298.626 High  
cufflinks 69.9259 0.0 196.128 High  

0 Strain