Gene : Phvul.005G059200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10836//PTHR10836:SF46 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  586
Name:  ? Phvul.005G059200 Secondary Identifier:  ? PAC:37153761
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ANAEROFRUCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris ANAGLYCOLYSIS-PWY Phaseolus vulgaris pathologic  
Pvulgaris GLUCONEO-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-1042 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris SUCSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G059200 0.5kb upstream 0.5kb upstream 7151 true Chr05: 8258108-8265258 Phaseolus vulgaris
Phvul.005G059200 0.5kb upstream 0.5kb upstream 500 false Chr05: 8264759-8265258 Phaseolus vulgaris
Phvul.005G059200 0.5kb downstream 0.5kb downstream 7151 true Chr05: 8257608-8264758 Phaseolus vulgaris
Phvul.005G059200 0.5kb downstream 0.5kb downstream 500 false Chr05: 8257608-8258107 Phaseolus vulgaris
Phvul.005G059200 1.0kb upstream 1.0kb upstream 7651 true Chr05: 8258108-8265758 Phaseolus vulgaris
Phvul.005G059200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8264759-8265758 Phaseolus vulgaris
Phvul.005G059200 1.0kb downstream 1.0kb downstream 7651 true Chr05: 8257108-8264758 Phaseolus vulgaris
Phvul.005G059200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8257108-8258107 Phaseolus vulgaris
Phvul.005G059200 2.0kb upstream 2.0kb upstream 8651 true Chr05: 8258108-8266758 Phaseolus vulgaris
Phvul.005G059200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8264759-8266758 Phaseolus vulgaris
Phvul.005G059200 2.0kb downstream 2.0kb downstream 8651 true Chr05: 8256108-8264758 Phaseolus vulgaris
Phvul.005G059200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8256108-8258107 Phaseolus vulgaris
Phvul.005G059200 5.0kb upstream 5.0kb upstream 11651 true Chr05: 8258108-8269758 Phaseolus vulgaris
Phvul.005G059200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8264759-8269758 Phaseolus vulgaris
Phvul.005G059200 5.0kb downstream 5.0kb downstream 11651 true Chr05: 8253108-8264758 Phaseolus vulgaris
Phvul.005G059200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8253108-8258107 Phaseolus vulgaris
Phvul.005G059200 10.0kb upstream 10.0kb upstream 16651 true Chr05: 8258108-8274758 Phaseolus vulgaris
Phvul.005G059200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8264759-8274758 Phaseolus vulgaris
Phvul.005G059200 10.0kb downstream 10.0kb downstream 16651 true Chr05: 8248108-8264758 Phaseolus vulgaris
Phvul.005G059200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8248108-8258107 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306260 5265 Fabidae View MSA
124063810 5270 Rosid View MSA
123738168 5271 Pentapetalae View MSA
122792653 5272 Eudicot View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3244 0.0 52.6719    
cufflinks 23.3653 0.0 60.4334    
cufflinks 6.8753 0.0 19.1756   Low
cufflinks 50.0154 0.0 131.296 High  
cufflinks 16.0812 0.0 42.137    
cufflinks 10.8386 0.0 29.0646    
cufflinks 42.0831 0.0 109.919 High  
cufflinks 162.675 0.0 487.014 High High
cufflinks 32.4322 0.0 83.9723 High  
cufflinks 14.2971 0.0 37.6135    
cufflinks 20.2605 0.0 52.5818    

0 Strain