Gene : Phvul.007G201700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23244//PTHR23244:SF294 - KELCH REPEAT DOMAIN // SUBFAMILY NOT NAMED Genomic Order:  1875
Name:  ? Phvul.007G201700 Secondary Identifier:  ? PAC:37165645
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G201700 0.5kb upstream 0.5kb upstream 4574 true Chr07: 32465851-32470424 Phaseolus vulgaris
Phvul.007G201700 0.5kb upstream 0.5kb upstream 500 false Chr07: 32469925-32470424 Phaseolus vulgaris
Phvul.007G201700 0.5kb downstream 0.5kb downstream 4574 true Chr07: 32465351-32469924 Phaseolus vulgaris
Phvul.007G201700 0.5kb downstream 0.5kb downstream 500 false Chr07: 32465351-32465850 Phaseolus vulgaris
Phvul.007G201700 1.0kb upstream 1.0kb upstream 5074 true Chr07: 32465851-32470924 Phaseolus vulgaris
Phvul.007G201700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 32469925-32470924 Phaseolus vulgaris
Phvul.007G201700 1.0kb downstream 1.0kb downstream 5074 true Chr07: 32464851-32469924 Phaseolus vulgaris
Phvul.007G201700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 32464851-32465850 Phaseolus vulgaris
Phvul.007G201700 2.0kb upstream 2.0kb upstream 6074 true Chr07: 32465851-32471924 Phaseolus vulgaris
Phvul.007G201700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 32469925-32471924 Phaseolus vulgaris
Phvul.007G201700 2.0kb downstream 2.0kb downstream 6074 true Chr07: 32463851-32469924 Phaseolus vulgaris
Phvul.007G201700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 32463851-32465850 Phaseolus vulgaris
Phvul.007G201700 5.0kb upstream 5.0kb upstream 9074 true Chr07: 32465851-32474924 Phaseolus vulgaris
Phvul.007G201700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 32469925-32474924 Phaseolus vulgaris
Phvul.007G201700 5.0kb downstream 5.0kb downstream 9074 true Chr07: 32460851-32469924 Phaseolus vulgaris
Phvul.007G201700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 32460851-32465850 Phaseolus vulgaris
Phvul.007G201700 10.0kb upstream 10.0kb upstream 14074 true Chr07: 32465851-32479924 Phaseolus vulgaris
Phvul.007G201700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 32469925-32479924 Phaseolus vulgaris
Phvul.007G201700 10.0kb downstream 10.0kb downstream 14074 true Chr07: 32455851-32469924 Phaseolus vulgaris
Phvul.007G201700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 32455851-32465850 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301027 5265 Fabidae View MSA
124070629 5270 Rosid View MSA
123742458 5271 Pentapetalae View MSA
122794340 5272 Eudicot View MSA
122048338 5273 Angiosperm View MSA
121348105 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.261879 0.0 0.987362 Low  
cufflinks 0.313727 0.0 1.16404 Low  
cufflinks 0.154256 0.0 0.604948 Low  
cufflinks 0.101125 0.0 0.412681 Low Low
cufflinks 1.96412 0.0 6.04638   High
cufflinks 0.643915 0.0 2.22965    
cufflinks 0.855587 0.0 2.86878    
cufflinks 0.251598 0.0 0.949192 Low  
cufflinks 0.329931 0.0 1.22011 Low  
cufflinks 0.219776 0.0 0.841142 Low  
cufflinks 8.40949 0.0 22.3828   High

0 Strain