Gene : Phvul.005G067500 P. vulgaris v2.1
Defline:  (1 of 3) K03152 - 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis (thiJ) Genomic Order:  672
Name:  ? Phvul.005G067500 Secondary Identifier:  ? PAC:37152500
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G067500 0.5kb upstream 0.5kb upstream 4413 true Chr05: 11493357-11497769 Phaseolus vulgaris
Phvul.005G067500 0.5kb upstream 0.5kb upstream 500 false Chr05: 11493357-11493856 Phaseolus vulgaris
Phvul.005G067500 0.5kb downstream 0.5kb downstream 4413 true Chr05: 11493857-11498269 Phaseolus vulgaris
Phvul.005G067500 0.5kb downstream 0.5kb downstream 500 false Chr05: 11497770-11498269 Phaseolus vulgaris
Phvul.005G067500 1.0kb upstream 1.0kb upstream 4913 true Chr05: 11492857-11497769 Phaseolus vulgaris
Phvul.005G067500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 11492857-11493856 Phaseolus vulgaris
Phvul.005G067500 1.0kb downstream 1.0kb downstream 4913 true Chr05: 11493857-11498769 Phaseolus vulgaris
Phvul.005G067500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 11497770-11498769 Phaseolus vulgaris
Phvul.005G067500 2.0kb upstream 2.0kb upstream 5913 true Chr05: 11491857-11497769 Phaseolus vulgaris
Phvul.005G067500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 11491857-11493856 Phaseolus vulgaris
Phvul.005G067500 2.0kb downstream 2.0kb downstream 5913 true Chr05: 11493857-11499769 Phaseolus vulgaris
Phvul.005G067500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 11497770-11499769 Phaseolus vulgaris
Phvul.005G067500 5.0kb upstream 5.0kb upstream 8913 true Chr05: 11488857-11497769 Phaseolus vulgaris
Phvul.005G067500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 11488857-11493856 Phaseolus vulgaris
Phvul.005G067500 5.0kb downstream 5.0kb downstream 8913 true Chr05: 11493857-11502769 Phaseolus vulgaris
Phvul.005G067500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 11497770-11502769 Phaseolus vulgaris
Phvul.005G067500 10.0kb upstream 10.0kb upstream 13913 true Chr05: 11483857-11497769 Phaseolus vulgaris
Phvul.005G067500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 11483857-11493856 Phaseolus vulgaris
Phvul.005G067500 10.0kb downstream 10.0kb downstream 13913 true Chr05: 11493857-11507769 Phaseolus vulgaris
Phvul.005G067500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 11497770-11507769 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303819 5265 Fabidae View MSA
124063705 5270 Rosid View MSA
123739735 5271 Pentapetalae View MSA
122788199 5272 Eudicot View MSA
122047245 5273 Angiosperm View MSA
121350648 5274 Embryophyte View MSA
123428584 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9749 0.0 56.8158   Low
cufflinks 52.5401 0.0 139.823 High High
cufflinks 44.4303 0.0 116.899 High  
cufflinks 42.8576 0.0 112.41 High  
cufflinks 40.3168 0.0 105.559 High  
cufflinks 41.0268 0.0 107.52 High  
cufflinks 25.5092 0.0 65.9652   Low
cufflinks 35.0326 0.0 91.2161 High  
cufflinks 31.8397 0.0 82.6294 High  
cufflinks 64.5458 0.0 174.567 High High
cufflinks 40.7411 0.0 106.737 High  

0 Strain