Gene : Phvul.007G206500 P. vulgaris v2.1
Defline:  (1 of 1) K04799 - flap endonuclease-1 (FEN1, RAD2) Genomic Order:  1922
Name:  ? Phvul.007G206500 Secondary Identifier:  ? PAC:37165268
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G206500 0.5kb upstream 0.5kb upstream 5742 true Chr07: 32928788-32934529 Phaseolus vulgaris
Phvul.007G206500 0.5kb upstream 0.5kb upstream 500 false Chr07: 32928788-32929287 Phaseolus vulgaris
Phvul.007G206500 0.5kb downstream 0.5kb downstream 5742 true Chr07: 32929288-32935029 Phaseolus vulgaris
Phvul.007G206500 0.5kb downstream 0.5kb downstream 500 false Chr07: 32934530-32935029 Phaseolus vulgaris
Phvul.007G206500 1.0kb upstream 1.0kb upstream 6242 true Chr07: 32928288-32934529 Phaseolus vulgaris
Phvul.007G206500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 32928288-32929287 Phaseolus vulgaris
Phvul.007G206500 1.0kb downstream 1.0kb downstream 6242 true Chr07: 32929288-32935529 Phaseolus vulgaris
Phvul.007G206500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 32934530-32935529 Phaseolus vulgaris
Phvul.007G206500 2.0kb upstream 2.0kb upstream 7242 true Chr07: 32927288-32934529 Phaseolus vulgaris
Phvul.007G206500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 32927288-32929287 Phaseolus vulgaris
Phvul.007G206500 2.0kb downstream 2.0kb downstream 7242 true Chr07: 32929288-32936529 Phaseolus vulgaris
Phvul.007G206500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 32934530-32936529 Phaseolus vulgaris
Phvul.007G206500 5.0kb upstream 5.0kb upstream 10242 true Chr07: 32924288-32934529 Phaseolus vulgaris
Phvul.007G206500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 32924288-32929287 Phaseolus vulgaris
Phvul.007G206500 5.0kb downstream 5.0kb downstream 10242 true Chr07: 32929288-32939529 Phaseolus vulgaris
Phvul.007G206500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 32934530-32939529 Phaseolus vulgaris
Phvul.007G206500 10.0kb upstream 10.0kb upstream 15242 true Chr07: 32919288-32934529 Phaseolus vulgaris
Phvul.007G206500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 32919288-32929287 Phaseolus vulgaris
Phvul.007G206500 10.0kb downstream 10.0kb downstream 15242 true Chr07: 32929288-32944529 Phaseolus vulgaris
Phvul.007G206500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 32934530-32944529 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300730 5265 Fabidae View MSA
124061895 5270 Rosid View MSA
123737846 5271 Pentapetalae View MSA
122788743 5272 Eudicot View MSA
122045143 5273 Angiosperm View MSA
121348118 5274 Embryophyte View MSA
123424263 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.47536 0.0 28.6367    
cufflinks 13.2927 0.0 41.6427   High
cufflinks 6.13896 0.0 20.7504   Low
cufflinks 5.89399 0.0 22.5264   Low
cufflinks 9.23605 0.0 31.6965    
cufflinks 9.16975 0.0 31.3358    
cufflinks 13.1172 0.0 41.2357    
cufflinks 16.8685 0.0 51.8008   High
cufflinks 9.78989 0.0 32.8872    
cufflinks 7.58665 0.0 24.8029    
cufflinks 10.7472 0.0 35.516    

0 Strain