Gene : Phvul.007G192800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31189:SF1 - 12S SEED STORAGE PROTEIN CRA1-RELATED Genomic Order:  1787
Name:  ? Phvul.007G192800 Secondary Identifier:  ? PAC:37163978
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G192800 0.5kb upstream 0.5kb upstream 3282 true Chr07: 31386770-31390051 Phaseolus vulgaris
Phvul.007G192800 0.5kb upstream 0.5kb upstream 500 false Chr07: 31386770-31387269 Phaseolus vulgaris
Phvul.007G192800 0.5kb downstream 0.5kb downstream 3282 true Chr07: 31387270-31390551 Phaseolus vulgaris
Phvul.007G192800 0.5kb downstream 0.5kb downstream 500 false Chr07: 31390052-31390551 Phaseolus vulgaris
Phvul.007G192800 1.0kb upstream 1.0kb upstream 3782 true Chr07: 31386270-31390051 Phaseolus vulgaris
Phvul.007G192800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 31386270-31387269 Phaseolus vulgaris
Phvul.007G192800 1.0kb downstream 1.0kb downstream 3782 true Chr07: 31387270-31391051 Phaseolus vulgaris
Phvul.007G192800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 31390052-31391051 Phaseolus vulgaris
Phvul.007G192800 2.0kb upstream 2.0kb upstream 4782 true Chr07: 31385270-31390051 Phaseolus vulgaris
Phvul.007G192800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 31385270-31387269 Phaseolus vulgaris
Phvul.007G192800 2.0kb downstream 2.0kb downstream 4782 true Chr07: 31387270-31392051 Phaseolus vulgaris
Phvul.007G192800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 31390052-31392051 Phaseolus vulgaris
Phvul.007G192800 5.0kb upstream 5.0kb upstream 7782 true Chr07: 31382270-31390051 Phaseolus vulgaris
Phvul.007G192800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 31382270-31387269 Phaseolus vulgaris
Phvul.007G192800 5.0kb downstream 5.0kb downstream 7782 true Chr07: 31387270-31395051 Phaseolus vulgaris
Phvul.007G192800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 31390052-31395051 Phaseolus vulgaris
Phvul.007G192800 10.0kb upstream 10.0kb upstream 12782 true Chr07: 31377270-31390051 Phaseolus vulgaris
Phvul.007G192800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 31377270-31387269 Phaseolus vulgaris
Phvul.007G192800 10.0kb downstream 10.0kb downstream 12782 true Chr07: 31387270-31400051 Phaseolus vulgaris
Phvul.007G192800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 31390052-31400051 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313136 5265 Fabidae View MSA
124062039 5270 Rosid View MSA
123752500 5271 Pentapetalae View MSA
122788518 5272 Eudicot View MSA
122051681 5273 Angiosperm View MSA
121312610 5274 Embryophyte View MSA
123349767 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.369406 0.0 1.33024 Low  
cufflinks 0.163436 0.0 0.630749 Low  
cufflinks 0.223009 0.0 0.838036 Low  
cufflinks 0.530995 0.0 1.84906 Low  
cufflinks 0.337267 0.0 1.22959 Low  
cufflinks 0.0817189 0.0 0.332085 Low Low
cufflinks 2.60947 0.0 7.48808   High
cufflinks 2.47865 0.0 7.18505   High
cufflinks 0.866513 0.0 2.81626    
cufflinks 0.468886 0.0 1.65841    
cufflinks 0.273848 0.0 1.01426 Low  

0 Strain