Gene : Phvul.007G192500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12383:SF5 - PEPTIDASE-S24/S26 DOMAIN-CONTAINING PROTEIN Genomic Order:  1784
Name:  ? Phvul.007G192500 Secondary Identifier:  ? PAC:37164479
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G192500 0.5kb upstream 0.5kb upstream 9264 true Chr07: 31344480-31353743 Phaseolus vulgaris
Phvul.007G192500 0.5kb upstream 0.5kb upstream 500 false Chr07: 31353244-31353743 Phaseolus vulgaris
Phvul.007G192500 0.5kb downstream 0.5kb downstream 9264 true Chr07: 31343980-31353243 Phaseolus vulgaris
Phvul.007G192500 0.5kb downstream 0.5kb downstream 500 false Chr07: 31343980-31344479 Phaseolus vulgaris
Phvul.007G192500 1.0kb upstream 1.0kb upstream 9764 true Chr07: 31344480-31354243 Phaseolus vulgaris
Phvul.007G192500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 31353244-31354243 Phaseolus vulgaris
Phvul.007G192500 1.0kb downstream 1.0kb downstream 9764 true Chr07: 31343480-31353243 Phaseolus vulgaris
Phvul.007G192500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 31343480-31344479 Phaseolus vulgaris
Phvul.007G192500 2.0kb upstream 2.0kb upstream 10764 true Chr07: 31344480-31355243 Phaseolus vulgaris
Phvul.007G192500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 31353244-31355243 Phaseolus vulgaris
Phvul.007G192500 2.0kb downstream 2.0kb downstream 10764 true Chr07: 31342480-31353243 Phaseolus vulgaris
Phvul.007G192500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 31342480-31344479 Phaseolus vulgaris
Phvul.007G192500 5.0kb upstream 5.0kb upstream 13764 true Chr07: 31344480-31358243 Phaseolus vulgaris
Phvul.007G192500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 31353244-31358243 Phaseolus vulgaris
Phvul.007G192500 5.0kb downstream 5.0kb downstream 13764 true Chr07: 31339480-31353243 Phaseolus vulgaris
Phvul.007G192500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 31339480-31344479 Phaseolus vulgaris
Phvul.007G192500 10.0kb upstream 10.0kb upstream 18764 true Chr07: 31344480-31363243 Phaseolus vulgaris
Phvul.007G192500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 31353244-31363243 Phaseolus vulgaris
Phvul.007G192500 10.0kb downstream 10.0kb downstream 18764 true Chr07: 31334480-31353243 Phaseolus vulgaris
Phvul.007G192500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 31334480-31344479 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313973 5265 Fabidae View MSA
124065093 5270 Rosid View MSA
123753378 5271 Pentapetalae View MSA
122790415 5272 Eudicot View MSA
122044247 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121345386 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.666 0.0 63.3423    
cufflinks 20.8843 0.0 60.8908    
cufflinks 15.5159 0.0 52.2801    
cufflinks 29.9252 0.0 96.6907   High
cufflinks 16.6358 0.0 50.917    
cufflinks 12.5562 0.0 39.8201   Low
cufflinks 15.8872 0.0 55.4756    
cufflinks 19.421 0.0 65.1062    
cufflinks 15.7042 0.0 47.987    
cufflinks 9.67733 0.0 32.4685   Low
cufflinks 19.7688 0.0 67.0124    

0 Strain