Gene : Phvul.005G054700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR15835:SF6 - F20D23.9 PROTEIN Genomic Order:  542
Name:  ? Phvul.005G054700 Secondary Identifier:  ? PAC:37153992
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G054700 0.5kb upstream 0.5kb upstream 10482 true Chr05: 7181796-7192277 Phaseolus vulgaris
Phvul.005G054700 0.5kb upstream 0.5kb upstream 500 false Chr05: 7181796-7182295 Phaseolus vulgaris
Phvul.005G054700 0.5kb downstream 0.5kb downstream 10482 true Chr05: 7182296-7192777 Phaseolus vulgaris
Phvul.005G054700 0.5kb downstream 0.5kb downstream 500 false Chr05: 7192278-7192777 Phaseolus vulgaris
Phvul.005G054700 1.0kb upstream 1.0kb upstream 10982 true Chr05: 7181296-7192277 Phaseolus vulgaris
Phvul.005G054700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7181296-7182295 Phaseolus vulgaris
Phvul.005G054700 1.0kb downstream 1.0kb downstream 10982 true Chr05: 7182296-7193277 Phaseolus vulgaris
Phvul.005G054700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7192278-7193277 Phaseolus vulgaris
Phvul.005G054700 2.0kb upstream 2.0kb upstream 11982 true Chr05: 7180296-7192277 Phaseolus vulgaris
Phvul.005G054700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7180296-7182295 Phaseolus vulgaris
Phvul.005G054700 2.0kb downstream 2.0kb downstream 11982 true Chr05: 7182296-7194277 Phaseolus vulgaris
Phvul.005G054700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7192278-7194277 Phaseolus vulgaris
Phvul.005G054700 5.0kb upstream 5.0kb upstream 14982 true Chr05: 7177296-7192277 Phaseolus vulgaris
Phvul.005G054700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7177296-7182295 Phaseolus vulgaris
Phvul.005G054700 5.0kb downstream 5.0kb downstream 14982 true Chr05: 7182296-7197277 Phaseolus vulgaris
Phvul.005G054700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7192278-7197277 Phaseolus vulgaris
Phvul.005G054700 10.0kb upstream 10.0kb upstream 19982 true Chr05: 7172296-7192277 Phaseolus vulgaris
Phvul.005G054700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7172296-7182295 Phaseolus vulgaris
Phvul.005G054700 10.0kb downstream 10.0kb downstream 19982 true Chr05: 7182296-7202277 Phaseolus vulgaris
Phvul.005G054700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7192278-7202277 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297172 5265 Fabidae View MSA
124065302 5270 Rosid View MSA
123751244 5271 Pentapetalae View MSA
122788021 5272 Eudicot View MSA
122045588 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.28138 0.0 24.0596   Low
cufflinks 13.6343 0.0 35.2711    
cufflinks 16.1154 0.0 41.8265    
cufflinks 8.46261 0.0 22.0396   Low
cufflinks 16.7643 0.0 43.5023    
cufflinks 15.9008 0.0 41.2589    
cufflinks 18.6734 0.0 48.7478    
cufflinks 18.3616 0.0 47.9207    
cufflinks 19.7812 0.0 51.7325    
cufflinks 24.8779 0.0 65.9331   High
cufflinks 15.833 0.0 41.0481    

0 Strain