Gene : Phvul.007G197000 P. vulgaris v2.1
Defline:  (1 of 4) PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Genomic Order:  1828
Name:  ? Phvul.007G197000 Secondary Identifier:  ? PAC:37167651
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G197000 0.5kb upstream 0.5kb upstream 2056 true Chr07: 32032479-32034534 Phaseolus vulgaris
Phvul.007G197000 0.5kb upstream 0.5kb upstream 500 false Chr07: 32032479-32032978 Phaseolus vulgaris
Phvul.007G197000 0.5kb downstream 0.5kb downstream 2056 true Chr07: 32032979-32035034 Phaseolus vulgaris
Phvul.007G197000 0.5kb downstream 0.5kb downstream 500 false Chr07: 32034535-32035034 Phaseolus vulgaris
Phvul.007G197000 1.0kb upstream 1.0kb upstream 2556 true Chr07: 32031979-32034534 Phaseolus vulgaris
Phvul.007G197000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 32031979-32032978 Phaseolus vulgaris
Phvul.007G197000 1.0kb downstream 1.0kb downstream 2556 true Chr07: 32032979-32035534 Phaseolus vulgaris
Phvul.007G197000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 32034535-32035534 Phaseolus vulgaris
Phvul.007G197000 2.0kb upstream 2.0kb upstream 3556 true Chr07: 32030979-32034534 Phaseolus vulgaris
Phvul.007G197000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 32030979-32032978 Phaseolus vulgaris
Phvul.007G197000 2.0kb downstream 2.0kb downstream 3556 true Chr07: 32032979-32036534 Phaseolus vulgaris
Phvul.007G197000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 32034535-32036534 Phaseolus vulgaris
Phvul.007G197000 5.0kb upstream 5.0kb upstream 6556 true Chr07: 32027979-32034534 Phaseolus vulgaris
Phvul.007G197000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 32027979-32032978 Phaseolus vulgaris
Phvul.007G197000 5.0kb downstream 5.0kb downstream 6556 true Chr07: 32032979-32039534 Phaseolus vulgaris
Phvul.007G197000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 32034535-32039534 Phaseolus vulgaris
Phvul.007G197000 10.0kb upstream 10.0kb upstream 11556 true Chr07: 32022979-32034534 Phaseolus vulgaris
Phvul.007G197000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 32022979-32032978 Phaseolus vulgaris
Phvul.007G197000 10.0kb downstream 10.0kb downstream 11556 true Chr07: 32032979-32044534 Phaseolus vulgaris
Phvul.007G197000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 32034535-32044534 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046836 5273 Angiosperm View MSA
122312202 5265 Fabidae View MSA
124072222 5270 Rosid View MSA
123751331 5271 Pentapetalae View MSA
122796895 5272 Eudicot View MSA
121350011 5274 Embryophyte View MSA
123381540 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8919 0.0 36.9803   Low
cufflinks 28.7768 0.0 74.4188    
cufflinks 18.3449 0.0 48.1125    
cufflinks 80.3865 0.0 215.537 High High
cufflinks 23.4092 0.0 60.8246    
cufflinks 24.3503 0.0 63.1438    
cufflinks 20.7778 0.0 54.0371    
cufflinks 17.3345 0.0 45.3811    
cufflinks 26.1001 0.0 67.5694    
cufflinks 30.0355 0.0 77.6442    
cufflinks 25.864 0.0 66.9802    

0 Strain