Gene : Phvul.005G042700 P. vulgaris v2.1
Genomic Order:  424 Name:  ? Phvul.005G042700
Secondary Identifier:  ? PAC:37154515
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G042700 0.5kb upstream 0.5kb upstream 1431 true Chr05: 4390777-4392207 Phaseolus vulgaris
Phvul.005G042700 0.5kb upstream 0.5kb upstream 500 false Chr05: 4391708-4392207 Phaseolus vulgaris
Phvul.005G042700 0.5kb downstream 0.5kb downstream 1431 true Chr05: 4390277-4391707 Phaseolus vulgaris
Phvul.005G042700 0.5kb downstream 0.5kb downstream 500 false Chr05: 4390277-4390776 Phaseolus vulgaris
Phvul.005G042700 1.0kb upstream 1.0kb upstream 1931 true Chr05: 4390777-4392707 Phaseolus vulgaris
Phvul.005G042700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4391708-4392707 Phaseolus vulgaris
Phvul.005G042700 1.0kb downstream 1.0kb downstream 1931 true Chr05: 4389777-4391707 Phaseolus vulgaris
Phvul.005G042700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4389777-4390776 Phaseolus vulgaris
Phvul.005G042700 2.0kb upstream 2.0kb upstream 2931 true Chr05: 4390777-4393707 Phaseolus vulgaris
Phvul.005G042700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4391708-4393707 Phaseolus vulgaris
Phvul.005G042700 2.0kb downstream 2.0kb downstream 2931 true Chr05: 4388777-4391707 Phaseolus vulgaris
Phvul.005G042700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4388777-4390776 Phaseolus vulgaris
Phvul.005G042700 5.0kb upstream 5.0kb upstream 5931 true Chr05: 4390777-4396707 Phaseolus vulgaris
Phvul.005G042700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4391708-4396707 Phaseolus vulgaris
Phvul.005G042700 5.0kb downstream 5.0kb downstream 5931 true Chr05: 4385777-4391707 Phaseolus vulgaris
Phvul.005G042700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4385777-4390776 Phaseolus vulgaris
Phvul.005G042700 10.0kb upstream 10.0kb upstream 10931 true Chr05: 4390777-4401707 Phaseolus vulgaris
Phvul.005G042700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4391708-4401707 Phaseolus vulgaris
Phvul.005G042700 10.0kb downstream 10.0kb downstream 10931 true Chr05: 4380777-4391707 Phaseolus vulgaris
Phvul.005G042700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4380777-4390776 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791744 5273 Angiosperm View MSA
122305145 5265 Fabidae View MSA
124071028 5270 Rosid View MSA
123742101 5271 Pentapetalae View MSA
122788839 5272 Eudicot View MSA
121063043 5274 Embryophyte View MSA
123102829 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.19595 0.0 4.29503    
cufflinks 0.437401 0.0 1.70574 Low Low
cufflinks 0.289789 0.0 1.16666 Low Low
cufflinks 2.53243 0.0 8.45235    
cufflinks 16.406 0.0 44.9288   High
cufflinks 2.51413 0.0 8.30802    
cufflinks 7.09371 0.0 20.7425    
cufflinks 1.61615 0.0 5.59233    
cufflinks 2.59405 0.0 8.48541    
cufflinks 20.3853 0.0 54.5538   High
cufflinks 39.7973 0.0 103.052 High High

0 Strain