Gene : Phvul.005G046300 P. vulgaris v2.1
Defline:  (1 of 5) KOG0508//KOG4412 - Ankyrin repeat protein // 26S proteasome regulatory complex, subunit PSMD10 Genomic Order:  462
Name:  ? Phvul.005G046300 Secondary Identifier:  ? PAC:37152526
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G046300 0.5kb upstream 0.5kb upstream 4468 true Chr05: 5089943-5094410 Phaseolus vulgaris
Phvul.005G046300 0.5kb upstream 0.5kb upstream 500 false Chr05: 5089943-5090442 Phaseolus vulgaris
Phvul.005G046300 0.5kb downstream 0.5kb downstream 4468 true Chr05: 5090443-5094910 Phaseolus vulgaris
Phvul.005G046300 0.5kb downstream 0.5kb downstream 500 false Chr05: 5094411-5094910 Phaseolus vulgaris
Phvul.005G046300 1.0kb upstream 1.0kb upstream 4968 true Chr05: 5089443-5094410 Phaseolus vulgaris
Phvul.005G046300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5089443-5090442 Phaseolus vulgaris
Phvul.005G046300 1.0kb downstream 1.0kb downstream 4968 true Chr05: 5090443-5095410 Phaseolus vulgaris
Phvul.005G046300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5094411-5095410 Phaseolus vulgaris
Phvul.005G046300 2.0kb upstream 2.0kb upstream 5968 true Chr05: 5088443-5094410 Phaseolus vulgaris
Phvul.005G046300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5088443-5090442 Phaseolus vulgaris
Phvul.005G046300 2.0kb downstream 2.0kb downstream 5968 true Chr05: 5090443-5096410 Phaseolus vulgaris
Phvul.005G046300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5094411-5096410 Phaseolus vulgaris
Phvul.005G046300 5.0kb upstream 5.0kb upstream 8968 true Chr05: 5085443-5094410 Phaseolus vulgaris
Phvul.005G046300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5085443-5090442 Phaseolus vulgaris
Phvul.005G046300 5.0kb downstream 5.0kb downstream 8968 true Chr05: 5090443-5099410 Phaseolus vulgaris
Phvul.005G046300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5094411-5099410 Phaseolus vulgaris
Phvul.005G046300 10.0kb upstream 10.0kb upstream 13968 true Chr05: 5080443-5094410 Phaseolus vulgaris
Phvul.005G046300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5080443-5090442 Phaseolus vulgaris
Phvul.005G046300 10.0kb downstream 10.0kb downstream 13968 true Chr05: 5090443-5104410 Phaseolus vulgaris
Phvul.005G046300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5094411-5104410 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315057 5265 Fabidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.116047 0.0 0.475289 Low  
cufflinks 0.495007 0.0 1.80377    
cufflinks 1.49641 0.0 4.8268   High
cufflinks 0.166489 0.0 0.667487 Low  
cufflinks 2.66946 0.0 8.17433   High
cufflinks 1.02867 0.0 3.47235    
cufflinks 0.276106 0.0 1.05619 Low  
cufflinks 0.0506391 0.0 0.221733 Low Low
cufflinks 0.120856 0.0 0.493821 Low  
cufflinks 0.220066 0.0 0.858696 Low  
cufflinks 1.33687 0.0 4.42129   High

0 Strain