Gene : Phvul.010G036300 P. vulgaris v2.1
Defline:  (1 of 1) K17888 - ubiquitin-like-conjugating enzyme ATG10, animal type (ATG10L, ATG10) Genomic Order:  355
Name:  ? Phvul.010G036300 Secondary Identifier:  ? PAC:37143941
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G036300 0.5kb upstream 0.5kb upstream 3699 true Chr10: 5364666-5368364 Phaseolus vulgaris
Phvul.010G036300 0.5kb upstream 0.5kb upstream 500 false Chr10: 5364666-5365165 Phaseolus vulgaris
Phvul.010G036300 0.5kb downstream 0.5kb downstream 3699 true Chr10: 5365166-5368864 Phaseolus vulgaris
Phvul.010G036300 0.5kb downstream 0.5kb downstream 500 false Chr10: 5368365-5368864 Phaseolus vulgaris
Phvul.010G036300 1.0kb upstream 1.0kb upstream 4199 true Chr10: 5364166-5368364 Phaseolus vulgaris
Phvul.010G036300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5364166-5365165 Phaseolus vulgaris
Phvul.010G036300 1.0kb downstream 1.0kb downstream 4199 true Chr10: 5365166-5369364 Phaseolus vulgaris
Phvul.010G036300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5368365-5369364 Phaseolus vulgaris
Phvul.010G036300 2.0kb upstream 2.0kb upstream 5199 true Chr10: 5363166-5368364 Phaseolus vulgaris
Phvul.010G036300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5363166-5365165 Phaseolus vulgaris
Phvul.010G036300 2.0kb downstream 2.0kb downstream 5199 true Chr10: 5365166-5370364 Phaseolus vulgaris
Phvul.010G036300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5368365-5370364 Phaseolus vulgaris
Phvul.010G036300 5.0kb upstream 5.0kb upstream 8199 true Chr10: 5360166-5368364 Phaseolus vulgaris
Phvul.010G036300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5360166-5365165 Phaseolus vulgaris
Phvul.010G036300 5.0kb downstream 5.0kb downstream 8199 true Chr10: 5365166-5373364 Phaseolus vulgaris
Phvul.010G036300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5368365-5373364 Phaseolus vulgaris
Phvul.010G036300 10.0kb upstream 10.0kb upstream 13199 true Chr10: 5355166-5368364 Phaseolus vulgaris
Phvul.010G036300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5355166-5365165 Phaseolus vulgaris
Phvul.010G036300 10.0kb downstream 10.0kb downstream 13199 true Chr10: 5365166-5378364 Phaseolus vulgaris
Phvul.010G036300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5368365-5378364 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299798 5265 Fabidae View MSA
124065951 5270 Rosid View MSA
123738819 5271 Pentapetalae View MSA
122789693 5272 Eudicot View MSA
122045044 5273 Angiosperm View MSA
121344822 5274 Embryophyte View MSA
123380107 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.02066 0.0 20.8029   High
cufflinks 2.50204 0.0 8.34493    
cufflinks 4.2426 0.0 13.2735    
cufflinks 4.24986 0.0 13.4439    
cufflinks 3.02933 0.0 9.96129    
cufflinks 2.90285 0.0 9.50342    
cufflinks 2.48596 0.0 8.30418   Low
cufflinks 3.29886 0.0 10.5923    
cufflinks 3.71468 0.0 11.8832    
cufflinks 3.54501 0.0 11.3772    
cufflinks 2.4143 0.0 8.14329   Low

0 Strain