Gene : Phvul.005G165900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR27001:SF102 - LYSM DOMAIN RECEPTOR-LIKE KINASE 3 Genomic Order:  1551
Name:  ? Phvul.005G165900 Secondary Identifier:  ? PAC:37152521
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G165900 0.5kb upstream 0.5kb upstream 5372 true Chr05: 39319580-39324951 Phaseolus vulgaris
Phvul.005G165900 0.5kb upstream 0.5kb upstream 500 false Chr05: 39319580-39320079 Phaseolus vulgaris
Phvul.005G165900 0.5kb downstream 0.5kb downstream 5372 true Chr05: 39320080-39325451 Phaseolus vulgaris
Phvul.005G165900 0.5kb downstream 0.5kb downstream 500 false Chr05: 39324952-39325451 Phaseolus vulgaris
Phvul.005G165900 1.0kb upstream 1.0kb upstream 5872 true Chr05: 39319080-39324951 Phaseolus vulgaris
Phvul.005G165900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39319080-39320079 Phaseolus vulgaris
Phvul.005G165900 1.0kb downstream 1.0kb downstream 5872 true Chr05: 39320080-39325951 Phaseolus vulgaris
Phvul.005G165900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39324952-39325951 Phaseolus vulgaris
Phvul.005G165900 2.0kb upstream 2.0kb upstream 6872 true Chr05: 39318080-39324951 Phaseolus vulgaris
Phvul.005G165900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39318080-39320079 Phaseolus vulgaris
Phvul.005G165900 2.0kb downstream 2.0kb downstream 6872 true Chr05: 39320080-39326951 Phaseolus vulgaris
Phvul.005G165900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39324952-39326951 Phaseolus vulgaris
Phvul.005G165900 5.0kb upstream 5.0kb upstream 9872 true Chr05: 39315080-39324951 Phaseolus vulgaris
Phvul.005G165900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39315080-39320079 Phaseolus vulgaris
Phvul.005G165900 5.0kb downstream 5.0kb downstream 9872 true Chr05: 39320080-39329951 Phaseolus vulgaris
Phvul.005G165900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39324952-39329951 Phaseolus vulgaris
Phvul.005G165900 10.0kb upstream 10.0kb upstream 14872 true Chr05: 39310080-39324951 Phaseolus vulgaris
Phvul.005G165900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39310080-39320079 Phaseolus vulgaris
Phvul.005G165900 10.0kb downstream 10.0kb downstream 14872 true Chr05: 39320080-39334951 Phaseolus vulgaris
Phvul.005G165900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39324952-39334951 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253712 5265 Fabidae View MSA
123996195 5270 Rosid View MSA
123570715 5271 Pentapetalae View MSA
122605450 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.250898 0.0 3.53547 Low Low
cufflinks 2.86003 0.0 31.7231   High
cufflinks 0.942985 0.0 22.7331    
cufflinks 2.82567 0.0 22.9576   High
cufflinks 1.63816 0.0 22.7409    
cufflinks 2.23007 0.0 26.9538    
cufflinks 0.288442 0.0 13.6185 Low Low
cufflinks 0.57344 0.0 13.4505    
cufflinks 0.719264 0.0 12.8245    
cufflinks 0.781003 0.0 31.8553    
cufflinks 1.45986 0.0 24.2655    

0 Strain