Gene : Phvul.010G030500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23130:SF95 - AUXIN-RESPONSIVE PROTEIN-RELATED Genomic Order:  304
Name:  ? Phvul.010G030500 Secondary Identifier:  ? PAC:37142470
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G030500 0.5kb upstream 0.5kb upstream 1398 true Chr10: 4423878-4425275 Phaseolus vulgaris
Phvul.010G030500 0.5kb upstream 0.5kb upstream 500 false Chr10: 4423878-4424377 Phaseolus vulgaris
Phvul.010G030500 0.5kb downstream 0.5kb downstream 1398 true Chr10: 4424378-4425775 Phaseolus vulgaris
Phvul.010G030500 0.5kb downstream 0.5kb downstream 500 false Chr10: 4425276-4425775 Phaseolus vulgaris
Phvul.010G030500 1.0kb upstream 1.0kb upstream 1898 true Chr10: 4423378-4425275 Phaseolus vulgaris
Phvul.010G030500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4423378-4424377 Phaseolus vulgaris
Phvul.010G030500 1.0kb downstream 1.0kb downstream 1898 true Chr10: 4424378-4426275 Phaseolus vulgaris
Phvul.010G030500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4425276-4426275 Phaseolus vulgaris
Phvul.010G030500 2.0kb upstream 2.0kb upstream 2898 true Chr10: 4422378-4425275 Phaseolus vulgaris
Phvul.010G030500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4422378-4424377 Phaseolus vulgaris
Phvul.010G030500 2.0kb downstream 2.0kb downstream 2898 true Chr10: 4424378-4427275 Phaseolus vulgaris
Phvul.010G030500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4425276-4427275 Phaseolus vulgaris
Phvul.010G030500 5.0kb upstream 5.0kb upstream 5898 true Chr10: 4419378-4425275 Phaseolus vulgaris
Phvul.010G030500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4419378-4424377 Phaseolus vulgaris
Phvul.010G030500 5.0kb downstream 5.0kb downstream 5898 true Chr10: 4424378-4430275 Phaseolus vulgaris
Phvul.010G030500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4425276-4430275 Phaseolus vulgaris
Phvul.010G030500 10.0kb upstream 10.0kb upstream 10898 true Chr10: 4414378-4425275 Phaseolus vulgaris
Phvul.010G030500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4414378-4424377 Phaseolus vulgaris
Phvul.010G030500 10.0kb downstream 10.0kb downstream 10898 true Chr10: 4424378-4435275 Phaseolus vulgaris
Phvul.010G030500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4425276-4435275 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306683 5265 Fabidae View MSA
124071203 5270 Rosid View MSA
123745343 5271 Pentapetalae View MSA
122771463 5272 Eudicot View MSA
122050143 5273 Angiosperm View MSA
121311761 5274 Embryophyte View MSA
123349016 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 88.0276 0.0 231.009 High  
cufflinks 279.326 0.0 819.497 High  
cufflinks 64.726 0.0 167.474 High  
cufflinks 370.047 0.0 1167.06 High High
cufflinks 181.414 0.0 509.287 High  
cufflinks 92.0257 0.0 241.68 High  
cufflinks 93.3487 0.0 247.411 High  
cufflinks 58.9863 0.0 152.568 High  
cufflinks 198.883 0.0 567.596 High  
cufflinks 7.85196 0.0 22.9554   Low
cufflinks 215.839 0.0 621.463 High  

0 Strain