Gene : Phvul.010G007000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR21148:SF1 - PHOSDUCIN-LIKE PROTEIN 3 Genomic Order:  65
Name:  ? Phvul.010G007000 Secondary Identifier:  ? PAC:37142729
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G007000 0.5kb upstream 0.5kb upstream 4520 true Chr10: 1038182-1042701 Phaseolus vulgaris
Phvul.010G007000 0.5kb upstream 0.5kb upstream 500 false Chr10: 1038182-1038681 Phaseolus vulgaris
Phvul.010G007000 0.5kb downstream 0.5kb downstream 4520 true Chr10: 1038682-1043201 Phaseolus vulgaris
Phvul.010G007000 0.5kb downstream 0.5kb downstream 500 false Chr10: 1042702-1043201 Phaseolus vulgaris
Phvul.010G007000 1.0kb upstream 1.0kb upstream 5020 true Chr10: 1037682-1042701 Phaseolus vulgaris
Phvul.010G007000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1037682-1038681 Phaseolus vulgaris
Phvul.010G007000 1.0kb downstream 1.0kb downstream 5020 true Chr10: 1038682-1043701 Phaseolus vulgaris
Phvul.010G007000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1042702-1043701 Phaseolus vulgaris
Phvul.010G007000 2.0kb upstream 2.0kb upstream 6020 true Chr10: 1036682-1042701 Phaseolus vulgaris
Phvul.010G007000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1036682-1038681 Phaseolus vulgaris
Phvul.010G007000 2.0kb downstream 2.0kb downstream 6020 true Chr10: 1038682-1044701 Phaseolus vulgaris
Phvul.010G007000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1042702-1044701 Phaseolus vulgaris
Phvul.010G007000 5.0kb upstream 5.0kb upstream 9020 true Chr10: 1033682-1042701 Phaseolus vulgaris
Phvul.010G007000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1033682-1038681 Phaseolus vulgaris
Phvul.010G007000 5.0kb downstream 5.0kb downstream 9020 true Chr10: 1038682-1047701 Phaseolus vulgaris
Phvul.010G007000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1042702-1047701 Phaseolus vulgaris
Phvul.010G007000 10.0kb upstream 10.0kb upstream 14020 true Chr10: 1028682-1042701 Phaseolus vulgaris
Phvul.010G007000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1028682-1038681 Phaseolus vulgaris
Phvul.010G007000 10.0kb downstream 10.0kb downstream 14020 true Chr10: 1038682-1052701 Phaseolus vulgaris
Phvul.010G007000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1042702-1052701 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307184 5265 Fabidae View MSA
124063753 5270 Rosid View MSA
123741848 5271 Pentapetalae View MSA
122790335 5272 Eudicot View MSA
122042488 5273 Angiosperm View MSA
121344718 5274 Embryophyte View MSA
123424986 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.0271 0.0 88.2957 High High
cufflinks 17.6154 0.0 47.69    
cufflinks 16.0989 0.0 43.8797    
cufflinks 37.9818 0.0 98.5631 High High
cufflinks 16.1462 0.0 44.1883    
cufflinks 12.7494 0.0 35.4769    
cufflinks 11.5613 0.0 32.4663   Low
cufflinks 13.789 0.0 37.9799    
cufflinks 16.953 0.0 46.1201    
cufflinks 18.8797 0.0 50.8666    
cufflinks 18.6253 0.0 50.3881    

0 Strain