Gene : Phvul.010G009800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10641:SF457 - TRANSCRIPTION FACTOR AS1 Genomic Order:  94
Name:  ? Phvul.010G009800 Secondary Identifier:  ? PAC:37142394
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G009800 0.5kb upstream 0.5kb upstream 4138 true Chr10: 1408037-1412174 Phaseolus vulgaris
Phvul.010G009800 0.5kb upstream 0.5kb upstream 500 false Chr10: 1408037-1408536 Phaseolus vulgaris
Phvul.010G009800 0.5kb downstream 0.5kb downstream 4138 true Chr10: 1408537-1412674 Phaseolus vulgaris
Phvul.010G009800 0.5kb downstream 0.5kb downstream 500 false Chr10: 1412175-1412674 Phaseolus vulgaris
Phvul.010G009800 1.0kb upstream 1.0kb upstream 4638 true Chr10: 1407537-1412174 Phaseolus vulgaris
Phvul.010G009800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1407537-1408536 Phaseolus vulgaris
Phvul.010G009800 1.0kb downstream 1.0kb downstream 4638 true Chr10: 1408537-1413174 Phaseolus vulgaris
Phvul.010G009800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1412175-1413174 Phaseolus vulgaris
Phvul.010G009800 2.0kb upstream 2.0kb upstream 5638 true Chr10: 1406537-1412174 Phaseolus vulgaris
Phvul.010G009800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1406537-1408536 Phaseolus vulgaris
Phvul.010G009800 2.0kb downstream 2.0kb downstream 5638 true Chr10: 1408537-1414174 Phaseolus vulgaris
Phvul.010G009800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1412175-1414174 Phaseolus vulgaris
Phvul.010G009800 5.0kb upstream 5.0kb upstream 8638 true Chr10: 1403537-1412174 Phaseolus vulgaris
Phvul.010G009800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1403537-1408536 Phaseolus vulgaris
Phvul.010G009800 5.0kb downstream 5.0kb downstream 8638 true Chr10: 1408537-1417174 Phaseolus vulgaris
Phvul.010G009800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1412175-1417174 Phaseolus vulgaris
Phvul.010G009800 10.0kb upstream 10.0kb upstream 13638 true Chr10: 1398537-1412174 Phaseolus vulgaris
Phvul.010G009800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1398537-1408536 Phaseolus vulgaris
Phvul.010G009800 10.0kb downstream 10.0kb downstream 13638 true Chr10: 1408537-1422174 Phaseolus vulgaris
Phvul.010G009800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1412175-1422174 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255050 5265 Fabidae View MSA
123996939 5270 Rosid View MSA
123753219 5271 Pentapetalae View MSA
122787054 5272 Eudicot View MSA
122045280 5273 Angiosperm View MSA
121310428 5274 Embryophyte View MSA
123347915 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4464 0.0 27.6154    
cufflinks 21.1041 0.0 54.5501    
cufflinks 26.2314 0.0 67.9798   High
cufflinks 12.0123 0.0 31.5862    
cufflinks 15.31 0.0 39.8029    
cufflinks 24.2919 0.0 62.8483    
cufflinks 4.14302 0.0 11.8342   Low
cufflinks 2.77875 0.0 8.30219   Low
cufflinks 4.10007 0.0 11.7332   Low
cufflinks 19.1488 0.0 49.5278    
cufflinks 19.8944 0.0 51.4423    

0 Strain