Gene : Phvul.010G011600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31384:SF1 - AUXIN RESPONSE FACTOR 12-RELATED Genomic Order:  103
Name:  ? Phvul.010G011600 Secondary Identifier:  ? PAC:37144092
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G011600 0.5kb upstream 0.5kb upstream 5103 true Chr10: 1580369-1585471 Phaseolus vulgaris
Phvul.010G011600 0.5kb upstream 0.5kb upstream 500 false Chr10: 1580369-1580868 Phaseolus vulgaris
Phvul.010G011600 0.5kb downstream 0.5kb downstream 5103 true Chr10: 1580869-1585971 Phaseolus vulgaris
Phvul.010G011600 0.5kb downstream 0.5kb downstream 500 false Chr10: 1585472-1585971 Phaseolus vulgaris
Phvul.010G011600 1.0kb upstream 1.0kb upstream 5603 true Chr10: 1579869-1585471 Phaseolus vulgaris
Phvul.010G011600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1579869-1580868 Phaseolus vulgaris
Phvul.010G011600 1.0kb downstream 1.0kb downstream 5603 true Chr10: 1580869-1586471 Phaseolus vulgaris
Phvul.010G011600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1585472-1586471 Phaseolus vulgaris
Phvul.010G011600 2.0kb upstream 2.0kb upstream 6603 true Chr10: 1578869-1585471 Phaseolus vulgaris
Phvul.010G011600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1578869-1580868 Phaseolus vulgaris
Phvul.010G011600 2.0kb downstream 2.0kb downstream 6603 true Chr10: 1580869-1587471 Phaseolus vulgaris
Phvul.010G011600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1585472-1587471 Phaseolus vulgaris
Phvul.010G011600 5.0kb upstream 5.0kb upstream 9603 true Chr10: 1575869-1585471 Phaseolus vulgaris
Phvul.010G011600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1575869-1580868 Phaseolus vulgaris
Phvul.010G011600 5.0kb downstream 5.0kb downstream 9603 true Chr10: 1580869-1590471 Phaseolus vulgaris
Phvul.010G011600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1585472-1590471 Phaseolus vulgaris
Phvul.010G011600 10.0kb upstream 10.0kb upstream 14603 true Chr10: 1570869-1585471 Phaseolus vulgaris
Phvul.010G011600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1570869-1580868 Phaseolus vulgaris
Phvul.010G011600 10.0kb downstream 10.0kb downstream 14603 true Chr10: 1580869-1595471 Phaseolus vulgaris
Phvul.010G011600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1585472-1595471 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314048 5265 Fabidae View MSA
124070371 5270 Rosid View MSA
123743990 5271 Pentapetalae View MSA
122792006 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.9788 0.0 25.9102    
cufflinks 14.8488 0.0 38.3943    
cufflinks 21.5732 0.0 56.3272    
cufflinks 6.398 0.0 17.055   Low
cufflinks 9.8199 0.0 25.5365    
cufflinks 35.3021 0.0 95.197 High  
cufflinks 63.2372 0.0 181.402 High High
cufflinks 52.1127 0.0 146.244 High High
cufflinks 78.7579 0.0 232.108 High High
cufflinks 15.1752 0.0 39.2421    
cufflinks 13.5599 0.0 35.0516    

0 Strain