Gene : Phvul.L001837 P. vulgaris v2.1
Defline:  (1 of 1) PTHR20973 - NON-SMC ELEMENT 1-RELATED Genomic Order:  3
Name:  ? Phvul.L001837 Secondary Identifier:  ? PAC:37157543
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001837 0.5kb upstream 0.5kb upstream 4639 true scaffold_13: 154008-158646 Phaseolus vulgaris
Phvul.L001837 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 158147-158646 Phaseolus vulgaris
Phvul.L001837 0.5kb downstream 0.5kb downstream 4639 true scaffold_13: 153508-158146 Phaseolus vulgaris
Phvul.L001837 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 153508-154007 Phaseolus vulgaris
Phvul.L001837 1.0kb upstream 1.0kb upstream 5139 true scaffold_13: 154008-159146 Phaseolus vulgaris
Phvul.L001837 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 158147-159146 Phaseolus vulgaris
Phvul.L001837 1.0kb downstream 1.0kb downstream 5139 true scaffold_13: 153008-158146 Phaseolus vulgaris
Phvul.L001837 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 153008-154007 Phaseolus vulgaris
Phvul.L001837 2.0kb upstream 2.0kb upstream 6139 true scaffold_13: 154008-160146 Phaseolus vulgaris
Phvul.L001837 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 158147-160146 Phaseolus vulgaris
Phvul.L001837 2.0kb downstream 2.0kb downstream 6139 true scaffold_13: 152008-158146 Phaseolus vulgaris
Phvul.L001837 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 152008-154007 Phaseolus vulgaris
Phvul.L001837 5.0kb upstream 5.0kb upstream 9139 true scaffold_13: 154008-163146 Phaseolus vulgaris
Phvul.L001837 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 158147-163146 Phaseolus vulgaris
Phvul.L001837 5.0kb downstream 5.0kb downstream 9139 true scaffold_13: 149008-158146 Phaseolus vulgaris
Phvul.L001837 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 149008-154007 Phaseolus vulgaris
Phvul.L001837 10.0kb upstream 10.0kb upstream 14139 true scaffold_13: 154008-168146 Phaseolus vulgaris
Phvul.L001837 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 158147-168146 Phaseolus vulgaris
Phvul.L001837 10.0kb downstream 10.0kb downstream 14139 true scaffold_13: 144008-158146 Phaseolus vulgaris
Phvul.L001837 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 144008-154007 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306773 5265 Fabidae View MSA
124060843 5270 Rosid View MSA
123738022 5271 Pentapetalae View MSA
122793177 5272 Eudicot View MSA
122042015 5273 Angiosperm View MSA
121350451 5274 Embryophyte View MSA
123426397 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.91478 0.0 11.7833    
cufflinks 4.64731 0.0 13.6922   High
cufflinks 3.0094 0.0 9.31447    
cufflinks 2.21758 0.0 7.15638   Low
cufflinks 3.56497 0.0 10.9308    
cufflinks 3.01675 0.0 9.34034    
cufflinks 4.55628 0.0 13.4242    
cufflinks 4.85034 0.0 14.1475   High
cufflinks 3.95981 0.0 11.8642    
cufflinks 2.14491 0.0 6.91743   Low
cufflinks 3.82284 0.0 11.583    

0 Strain