Gene : Phvul.005G152900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Genomic Order:  1425
Name:  ? Phvul.005G152900 Secondary Identifier:  ? PAC:37154090
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G152900 0.5kb upstream 0.5kb upstream 1834 true Chr05: 38290734-38292567 Phaseolus vulgaris
Phvul.005G152900 0.5kb upstream 0.5kb upstream 500 false Chr05: 38292068-38292567 Phaseolus vulgaris
Phvul.005G152900 0.5kb downstream 0.5kb downstream 1834 true Chr05: 38290234-38292067 Phaseolus vulgaris
Phvul.005G152900 0.5kb downstream 0.5kb downstream 500 false Chr05: 38290234-38290733 Phaseolus vulgaris
Phvul.005G152900 1.0kb upstream 1.0kb upstream 2334 true Chr05: 38290734-38293067 Phaseolus vulgaris
Phvul.005G152900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38292068-38293067 Phaseolus vulgaris
Phvul.005G152900 1.0kb downstream 1.0kb downstream 2334 true Chr05: 38289734-38292067 Phaseolus vulgaris
Phvul.005G152900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38289734-38290733 Phaseolus vulgaris
Phvul.005G152900 2.0kb upstream 2.0kb upstream 3334 true Chr05: 38290734-38294067 Phaseolus vulgaris
Phvul.005G152900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38292068-38294067 Phaseolus vulgaris
Phvul.005G152900 2.0kb downstream 2.0kb downstream 3334 true Chr05: 38288734-38292067 Phaseolus vulgaris
Phvul.005G152900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38288734-38290733 Phaseolus vulgaris
Phvul.005G152900 5.0kb upstream 5.0kb upstream 6334 true Chr05: 38290734-38297067 Phaseolus vulgaris
Phvul.005G152900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38292068-38297067 Phaseolus vulgaris
Phvul.005G152900 5.0kb downstream 5.0kb downstream 6334 true Chr05: 38285734-38292067 Phaseolus vulgaris
Phvul.005G152900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38285734-38290733 Phaseolus vulgaris
Phvul.005G152900 10.0kb upstream 10.0kb upstream 11334 true Chr05: 38290734-38302067 Phaseolus vulgaris
Phvul.005G152900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38292068-38302067 Phaseolus vulgaris
Phvul.005G152900 10.0kb downstream 10.0kb downstream 11334 true Chr05: 38280734-38292067 Phaseolus vulgaris
Phvul.005G152900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38280734-38290733 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028011 5273 Angiosperm View MSA
122301451 5265 Fabidae View MSA
124071091 5270 Rosid View MSA
123752599 5271 Pentapetalae View MSA
122791242 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.8644 0.0 69.471    
cufflinks 5.53187 0.0 15.9898   Low
cufflinks 6.97955 0.0 19.7601   Low
cufflinks 40.5445 0.0 105.168 High  
cufflinks 12.7998 0.0 34.3825    
cufflinks 28.6165 0.0 73.9873    
cufflinks 33.2972 0.0 86.1242 High  
cufflinks 67.2719 0.0 178.775 High High
cufflinks 31.3096 0.0 80.9385 High  
cufflinks 4.80182 0.0 14.1371   Low
cufflinks 32.8071 0.0 84.81    

0 Strain