Gene : Phvul.005G128400 P. vulgaris v2.1
Defline:  (1 of 37) PF03000 - NPH3 family (NPH3) Genomic Order:  1291
Name:  ? Phvul.005G128400 Secondary Identifier:  ? PAC:37153199
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G128400 0.5kb upstream 0.5kb upstream 4524 true Chr05: 36614170-36618693 Phaseolus vulgaris
Phvul.005G128400 0.5kb upstream 0.5kb upstream 500 false Chr05: 36618194-36618693 Phaseolus vulgaris
Phvul.005G128400 0.5kb downstream 0.5kb downstream 4524 true Chr05: 36613670-36618193 Phaseolus vulgaris
Phvul.005G128400 0.5kb downstream 0.5kb downstream 500 false Chr05: 36613670-36614169 Phaseolus vulgaris
Phvul.005G128400 1.0kb upstream 1.0kb upstream 5024 true Chr05: 36614170-36619193 Phaseolus vulgaris
Phvul.005G128400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36618194-36619193 Phaseolus vulgaris
Phvul.005G128400 1.0kb downstream 1.0kb downstream 5024 true Chr05: 36613170-36618193 Phaseolus vulgaris
Phvul.005G128400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36613170-36614169 Phaseolus vulgaris
Phvul.005G128400 2.0kb upstream 2.0kb upstream 6024 true Chr05: 36614170-36620193 Phaseolus vulgaris
Phvul.005G128400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36618194-36620193 Phaseolus vulgaris
Phvul.005G128400 2.0kb downstream 2.0kb downstream 6024 true Chr05: 36612170-36618193 Phaseolus vulgaris
Phvul.005G128400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36612170-36614169 Phaseolus vulgaris
Phvul.005G128400 5.0kb upstream 5.0kb upstream 9024 true Chr05: 36614170-36623193 Phaseolus vulgaris
Phvul.005G128400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36618194-36623193 Phaseolus vulgaris
Phvul.005G128400 5.0kb downstream 5.0kb downstream 9024 true Chr05: 36609170-36618193 Phaseolus vulgaris
Phvul.005G128400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36609170-36614169 Phaseolus vulgaris
Phvul.005G128400 10.0kb upstream 10.0kb upstream 14024 true Chr05: 36614170-36628193 Phaseolus vulgaris
Phvul.005G128400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36618194-36628193 Phaseolus vulgaris
Phvul.005G128400 10.0kb downstream 10.0kb downstream 14024 true Chr05: 36604170-36618193 Phaseolus vulgaris
Phvul.005G128400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36604170-36614169 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306491 5265 Fabidae View MSA
124061696 5270 Rosid View MSA
123736594 5271 Pentapetalae View MSA
122785807 5272 Eudicot View MSA
122045563 5273 Angiosperm View MSA
121310465 5274 Embryophyte View MSA
123347939 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.84196 0.0 15.9219    
cufflinks 3.56841 0.0 10.1887   Low
cufflinks 11.5128 0.0 29.9732   High
cufflinks 7.0427 0.0 19.0396    
cufflinks 7.48059 0.0 20.0847    
cufflinks 12.7979 0.0 33.2321   High
cufflinks 10.5611 0.0 27.6371    
cufflinks 6.95953 0.0 18.6475    
cufflinks 8.64107 0.0 22.9268    
cufflinks 4.60367 0.0 12.8384   Low
cufflinks 8.30684 0.0 22.1197    

0 Strain