Gene : Phvul.005G128200 P. vulgaris v2.1
Defline:  (1 of 1) K11824 - AP-2 complex subunit alpha (AP2A) Genomic Order:  1289
Name:  ? Phvul.005G128200 Secondary Identifier:  ? PAC:37152905
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G128200 0.5kb upstream 0.5kb upstream 15615 true Chr05: 36590098-36605712 Phaseolus vulgaris
Phvul.005G128200 0.5kb upstream 0.5kb upstream 500 false Chr05: 36605213-36605712 Phaseolus vulgaris
Phvul.005G128200 0.5kb downstream 0.5kb downstream 15615 true Chr05: 36589598-36605212 Phaseolus vulgaris
Phvul.005G128200 0.5kb downstream 0.5kb downstream 500 false Chr05: 36589598-36590097 Phaseolus vulgaris
Phvul.005G128200 1.0kb upstream 1.0kb upstream 16115 true Chr05: 36590098-36606212 Phaseolus vulgaris
Phvul.005G128200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36605213-36606212 Phaseolus vulgaris
Phvul.005G128200 1.0kb downstream 1.0kb downstream 16115 true Chr05: 36589098-36605212 Phaseolus vulgaris
Phvul.005G128200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36589098-36590097 Phaseolus vulgaris
Phvul.005G128200 2.0kb upstream 2.0kb upstream 17115 true Chr05: 36590098-36607212 Phaseolus vulgaris
Phvul.005G128200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36605213-36607212 Phaseolus vulgaris
Phvul.005G128200 2.0kb downstream 2.0kb downstream 17115 true Chr05: 36588098-36605212 Phaseolus vulgaris
Phvul.005G128200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36588098-36590097 Phaseolus vulgaris
Phvul.005G128200 5.0kb upstream 5.0kb upstream 20115 true Chr05: 36590098-36610212 Phaseolus vulgaris
Phvul.005G128200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36605213-36610212 Phaseolus vulgaris
Phvul.005G128200 5.0kb downstream 5.0kb downstream 20115 true Chr05: 36585098-36605212 Phaseolus vulgaris
Phvul.005G128200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36585098-36590097 Phaseolus vulgaris
Phvul.005G128200 10.0kb upstream 10.0kb upstream 25115 true Chr05: 36590098-36615212 Phaseolus vulgaris
Phvul.005G128200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36605213-36615212 Phaseolus vulgaris
Phvul.005G128200 10.0kb downstream 10.0kb downstream 25115 true Chr05: 36580098-36605212 Phaseolus vulgaris
Phvul.005G128200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36580098-36590097 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299920 5265 Fabidae View MSA
124063183 5270 Rosid View MSA
123736751 5271 Pentapetalae View MSA
122792631 5272 Eudicot View MSA
122046006 5273 Angiosperm View MSA
121350469 5274 Embryophyte View MSA
123424291 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.09021 0.0 29.7606   Low
cufflinks 19.8442 0.0 65.2644    
cufflinks 24.961 0.0 85.299    
cufflinks 16.6095 0.0 54.0357    
cufflinks 25.6352 0.0 87.2732    
cufflinks 25.952 0.0 88.9305    
cufflinks 30.1157 0.0 106.137 High  
cufflinks 26.4257 0.0 91.6994    
cufflinks 36.9256 0.0 134.931 High High
cufflinks 34.3615 0.0 124.213    
cufflinks 24.3683 0.0 82.0998    

0 Strain