Gene : Phvul.007G270900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11960:SF12 - EUKARYOTIC TRANSLATION INITIATION FACTOR ISOFORM 4E Genomic Order:  2568
Name:  ? Phvul.007G270900 Secondary Identifier:  ? PAC:37163966
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G270900 0.5kb upstream 0.5kb upstream 5788 true Chr07: 39212031-39217818 Phaseolus vulgaris
Phvul.007G270900 0.5kb upstream 0.5kb upstream 500 false Chr07: 39212031-39212530 Phaseolus vulgaris
Phvul.007G270900 0.5kb downstream 0.5kb downstream 5788 true Chr07: 39212531-39218318 Phaseolus vulgaris
Phvul.007G270900 0.5kb downstream 0.5kb downstream 500 false Chr07: 39217819-39218318 Phaseolus vulgaris
Phvul.007G270900 1.0kb upstream 1.0kb upstream 6288 true Chr07: 39211531-39217818 Phaseolus vulgaris
Phvul.007G270900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39211531-39212530 Phaseolus vulgaris
Phvul.007G270900 1.0kb downstream 1.0kb downstream 6288 true Chr07: 39212531-39218818 Phaseolus vulgaris
Phvul.007G270900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39217819-39218818 Phaseolus vulgaris
Phvul.007G270900 2.0kb upstream 2.0kb upstream 7288 true Chr07: 39210531-39217818 Phaseolus vulgaris
Phvul.007G270900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39210531-39212530 Phaseolus vulgaris
Phvul.007G270900 2.0kb downstream 2.0kb downstream 7288 true Chr07: 39212531-39219818 Phaseolus vulgaris
Phvul.007G270900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39217819-39219818 Phaseolus vulgaris
Phvul.007G270900 5.0kb upstream 5.0kb upstream 10288 true Chr07: 39207531-39217818 Phaseolus vulgaris
Phvul.007G270900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39207531-39212530 Phaseolus vulgaris
Phvul.007G270900 5.0kb downstream 5.0kb downstream 10288 true Chr07: 39212531-39222818 Phaseolus vulgaris
Phvul.007G270900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39217819-39222818 Phaseolus vulgaris
Phvul.007G270900 10.0kb upstream 10.0kb upstream 15288 true Chr07: 39202531-39217818 Phaseolus vulgaris
Phvul.007G270900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39202531-39212530 Phaseolus vulgaris
Phvul.007G270900 10.0kb downstream 10.0kb downstream 15288 true Chr07: 39212531-39227818 Phaseolus vulgaris
Phvul.007G270900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39217819-39227818 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301107 5265 Fabidae View MSA
124067941 5270 Rosid View MSA
123737003 5271 Pentapetalae View MSA
122788011 5272 Eudicot View MSA
122048910 5273 Angiosperm View MSA
121311166 5274 Embryophyte View MSA
123428039 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.515 0.0 150.103 High  
cufflinks 52.6085 0.0 136.73 High  
cufflinks 41.4466 0.0 107.19 High  
cufflinks 102.765 0.0 277.254 High High
cufflinks 70.3267 0.0 184.902 High  
cufflinks 32.0005 0.0 82.7966   Low
cufflinks 46.6471 0.0 120.837 High  
cufflinks 46.135 0.0 119.508 High  
cufflinks 71.1181 0.0 187.364 High  
cufflinks 35.9119 0.0 92.8263 High Low
cufflinks 71.9662 0.0 189.67 High  

0 Strain