Gene : Phvul.007G271000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR35709:SF1 - PROTEIN PROTON GRADIENT REGULATION 5, CHLOROPLASTIC Genomic Order:  2569
Name:  ? Phvul.007G271000 Secondary Identifier:  ? PAC:37164609
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G271000 0.5kb upstream 0.5kb upstream 2552 true Chr07: 39220277-39222828 Phaseolus vulgaris
Phvul.007G271000 0.5kb upstream 0.5kb upstream 500 false Chr07: 39222329-39222828 Phaseolus vulgaris
Phvul.007G271000 0.5kb downstream 0.5kb downstream 2552 true Chr07: 39219777-39222328 Phaseolus vulgaris
Phvul.007G271000 0.5kb downstream 0.5kb downstream 500 false Chr07: 39219777-39220276 Phaseolus vulgaris
Phvul.007G271000 1.0kb upstream 1.0kb upstream 3052 true Chr07: 39220277-39223328 Phaseolus vulgaris
Phvul.007G271000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39222329-39223328 Phaseolus vulgaris
Phvul.007G271000 1.0kb downstream 1.0kb downstream 3052 true Chr07: 39219277-39222328 Phaseolus vulgaris
Phvul.007G271000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39219277-39220276 Phaseolus vulgaris
Phvul.007G271000 2.0kb upstream 2.0kb upstream 4052 true Chr07: 39220277-39224328 Phaseolus vulgaris
Phvul.007G271000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39222329-39224328 Phaseolus vulgaris
Phvul.007G271000 2.0kb downstream 2.0kb downstream 4052 true Chr07: 39218277-39222328 Phaseolus vulgaris
Phvul.007G271000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39218277-39220276 Phaseolus vulgaris
Phvul.007G271000 5.0kb upstream 5.0kb upstream 7052 true Chr07: 39220277-39227328 Phaseolus vulgaris
Phvul.007G271000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39222329-39227328 Phaseolus vulgaris
Phvul.007G271000 5.0kb downstream 5.0kb downstream 7052 true Chr07: 39215277-39222328 Phaseolus vulgaris
Phvul.007G271000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39215277-39220276 Phaseolus vulgaris
Phvul.007G271000 10.0kb upstream 10.0kb upstream 12052 true Chr07: 39220277-39232328 Phaseolus vulgaris
Phvul.007G271000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39222329-39232328 Phaseolus vulgaris
Phvul.007G271000 10.0kb downstream 10.0kb downstream 12052 true Chr07: 39210277-39222328 Phaseolus vulgaris
Phvul.007G271000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39210277-39220276 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313329 5265 Fabidae View MSA
124063671 5270 Rosid View MSA
123746735 5271 Pentapetalae View MSA
122772016 5272 Eudicot View MSA
122041936 5273 Angiosperm View MSA
121350110 5274 Embryophyte View MSA
123425373 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9704 0.0 39.7213    
cufflinks 16.5323 0.0 46.1459    
cufflinks 111.729 0.0 292.526 High High
cufflinks 14.6522 0.0 41.7647    
cufflinks 13.4078 0.0 38.6022    
cufflinks 61.7439 0.0 159.624 High High
cufflinks 0.506811 0.0 2.00106 Low Low
cufflinks 0.333466 0.0 1.359 Low Low
cufflinks 0.489762 0.0 1.9382 Low Low
cufflinks 7.22335 0.0 22.1036    
cufflinks 14.6631 0.0 41.536    

0 Strain