Gene : Phvul.005G130800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Genomic Order:  1315
Name:  ? Phvul.005G130800 Secondary Identifier:  ? PAC:37152439
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5980 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G130800 0.5kb upstream 0.5kb upstream 3108 true Chr05: 36936494-36939601 Phaseolus vulgaris
Phvul.005G130800 0.5kb upstream 0.5kb upstream 500 false Chr05: 36936494-36936993 Phaseolus vulgaris
Phvul.005G130800 0.5kb downstream 0.5kb downstream 3108 true Chr05: 36936994-36940101 Phaseolus vulgaris
Phvul.005G130800 0.5kb downstream 0.5kb downstream 500 false Chr05: 36939602-36940101 Phaseolus vulgaris
Phvul.005G130800 1.0kb upstream 1.0kb upstream 3608 true Chr05: 36935994-36939601 Phaseolus vulgaris
Phvul.005G130800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36935994-36936993 Phaseolus vulgaris
Phvul.005G130800 1.0kb downstream 1.0kb downstream 3608 true Chr05: 36936994-36940601 Phaseolus vulgaris
Phvul.005G130800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36939602-36940601 Phaseolus vulgaris
Phvul.005G130800 2.0kb upstream 2.0kb upstream 4608 true Chr05: 36934994-36939601 Phaseolus vulgaris
Phvul.005G130800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36934994-36936993 Phaseolus vulgaris
Phvul.005G130800 2.0kb downstream 2.0kb downstream 4608 true Chr05: 36936994-36941601 Phaseolus vulgaris
Phvul.005G130800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36939602-36941601 Phaseolus vulgaris
Phvul.005G130800 5.0kb upstream 5.0kb upstream 7608 true Chr05: 36931994-36939601 Phaseolus vulgaris
Phvul.005G130800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36931994-36936993 Phaseolus vulgaris
Phvul.005G130800 5.0kb downstream 5.0kb downstream 7608 true Chr05: 36936994-36944601 Phaseolus vulgaris
Phvul.005G130800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36939602-36944601 Phaseolus vulgaris
Phvul.005G130800 10.0kb upstream 10.0kb upstream 12608 true Chr05: 36926994-36939601 Phaseolus vulgaris
Phvul.005G130800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36926994-36936993 Phaseolus vulgaris
Phvul.005G130800 10.0kb downstream 10.0kb downstream 12608 true Chr05: 36936994-36949601 Phaseolus vulgaris
Phvul.005G130800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36939602-36949601 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314600 5265 Fabidae View MSA
124063526 5270 Rosid View MSA
123741698 5271 Pentapetalae View MSA
122788923 5272 Eudicot View MSA
122042963 5273 Angiosperm View MSA
121350379 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.818997 0.0 2.77465    
cufflinks 3.29077 0.0 9.54349    
cufflinks 3.46282 0.0 10.0162    
cufflinks 2.41147 0.0 7.24945    
cufflinks 1.51543 0.0 4.79136    
cufflinks 5.24163 0.0 14.5272   High
cufflinks 1.33281 0.0 4.26683    
cufflinks 3.02591 0.0 8.83673    
cufflinks 1.79636 0.0 5.57558    
cufflinks 0.0990709 0.0 0.404565 Low Low
cufflinks 1.6693 0.0 5.21948    

0 Strain