Gene : Phvul.007G277200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31008:SF0 - COP1-INTERACTING PROTEIN-LIKE PROTEIN Genomic Order:  2632
Name:  ? Phvul.007G277200 Secondary Identifier:  ? PAC:37164964
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G277200 0.5kb upstream 0.5kb upstream 8817 true Chr07: 39723600-39732416 Phaseolus vulgaris
Phvul.007G277200 0.5kb upstream 0.5kb upstream 500 false Chr07: 39731917-39732416 Phaseolus vulgaris
Phvul.007G277200 0.5kb downstream 0.5kb downstream 8817 true Chr07: 39723100-39731916 Phaseolus vulgaris
Phvul.007G277200 0.5kb downstream 0.5kb downstream 500 false Chr07: 39723100-39723599 Phaseolus vulgaris
Phvul.007G277200 1.0kb upstream 1.0kb upstream 9317 true Chr07: 39723600-39732916 Phaseolus vulgaris
Phvul.007G277200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39731917-39732916 Phaseolus vulgaris
Phvul.007G277200 1.0kb downstream 1.0kb downstream 9317 true Chr07: 39722600-39731916 Phaseolus vulgaris
Phvul.007G277200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39722600-39723599 Phaseolus vulgaris
Phvul.007G277200 2.0kb upstream 2.0kb upstream 10317 true Chr07: 39723600-39733916 Phaseolus vulgaris
Phvul.007G277200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39731917-39733916 Phaseolus vulgaris
Phvul.007G277200 2.0kb downstream 2.0kb downstream 10317 true Chr07: 39721600-39731916 Phaseolus vulgaris
Phvul.007G277200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39721600-39723599 Phaseolus vulgaris
Phvul.007G277200 5.0kb upstream 5.0kb upstream 13317 true Chr07: 39723600-39736916 Phaseolus vulgaris
Phvul.007G277200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39731917-39736916 Phaseolus vulgaris
Phvul.007G277200 5.0kb downstream 5.0kb downstream 13317 true Chr07: 39718600-39731916 Phaseolus vulgaris
Phvul.007G277200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39718600-39723599 Phaseolus vulgaris
Phvul.007G277200 10.0kb upstream 10.0kb upstream 18317 true Chr07: 39723600-39741916 Phaseolus vulgaris
Phvul.007G277200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39731917-39741916 Phaseolus vulgaris
Phvul.007G277200 10.0kb downstream 10.0kb downstream 18317 true Chr07: 39713600-39731916 Phaseolus vulgaris
Phvul.007G277200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39713600-39723599 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254649 5265 Fabidae View MSA
124060773 5270 Rosid View MSA
123744546 5271 Pentapetalae View MSA
122797843 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.800835 0.0 3.48873   Low
cufflinks 4.45091 0.0 19.7619    
cufflinks 8.92165 0.0 37.1786   High
cufflinks 1.5307 0.0 5.75978   Low
cufflinks 4.02121 0.0 18.5742    
cufflinks 8.02641 0.0 37.6223    
cufflinks 4.30578 0.0 19.395    
cufflinks 3.88476 0.0 20.3836    
cufflinks 3.45295 0.0 20.9799    
cufflinks 11.8812 0.0 49.2322   High
cufflinks 3.78415 0.0 14.9887    

0 Strain