Gene : Phvul.005G134600 P. vulgaris v2.1
Defline:  (1 of 3) K15501 - serine/threonine-protein phosphatase 6 regulatory subunit 3 (PPP6R3, SAPS3) Genomic Order:  1355
Name:  ? Phvul.005G134600 Secondary Identifier:  ? PAC:37153699
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G134600 0.5kb upstream 0.5kb upstream 10368 true Chr05: 37493308-37503675 Phaseolus vulgaris
Phvul.005G134600 0.5kb upstream 0.5kb upstream 500 false Chr05: 37503176-37503675 Phaseolus vulgaris
Phvul.005G134600 0.5kb downstream 0.5kb downstream 10368 true Chr05: 37492808-37503175 Phaseolus vulgaris
Phvul.005G134600 0.5kb downstream 0.5kb downstream 500 false Chr05: 37492808-37493307 Phaseolus vulgaris
Phvul.005G134600 1.0kb upstream 1.0kb upstream 10868 true Chr05: 37493308-37504175 Phaseolus vulgaris
Phvul.005G134600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37503176-37504175 Phaseolus vulgaris
Phvul.005G134600 1.0kb downstream 1.0kb downstream 10868 true Chr05: 37492308-37503175 Phaseolus vulgaris
Phvul.005G134600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37492308-37493307 Phaseolus vulgaris
Phvul.005G134600 2.0kb upstream 2.0kb upstream 11868 true Chr05: 37493308-37505175 Phaseolus vulgaris
Phvul.005G134600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37503176-37505175 Phaseolus vulgaris
Phvul.005G134600 2.0kb downstream 2.0kb downstream 11868 true Chr05: 37491308-37503175 Phaseolus vulgaris
Phvul.005G134600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37491308-37493307 Phaseolus vulgaris
Phvul.005G134600 5.0kb upstream 5.0kb upstream 14868 true Chr05: 37493308-37508175 Phaseolus vulgaris
Phvul.005G134600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37503176-37508175 Phaseolus vulgaris
Phvul.005G134600 5.0kb downstream 5.0kb downstream 14868 true Chr05: 37488308-37503175 Phaseolus vulgaris
Phvul.005G134600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37488308-37493307 Phaseolus vulgaris
Phvul.005G134600 10.0kb upstream 10.0kb upstream 19868 true Chr05: 37493308-37513175 Phaseolus vulgaris
Phvul.005G134600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37503176-37513175 Phaseolus vulgaris
Phvul.005G134600 10.0kb downstream 10.0kb downstream 19868 true Chr05: 37483308-37503175 Phaseolus vulgaris
Phvul.005G134600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37483308-37493307 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312894 5265 Fabidae View MSA
124069403 5270 Rosid View MSA
123742234 5271 Pentapetalae View MSA
122794805 5272 Eudicot View MSA
122051052 5273 Angiosperm View MSA
121347725 5274 Embryophyte View MSA
123428189 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3448 0.0 45.5211   Low
cufflinks 24.726 0.0 80.4039    
cufflinks 35.2666 0.0 121.239   High
cufflinks 15.6685 0.0 49.7062   Low
cufflinks 25.9887 0.0 84.2245    
cufflinks 31.6765 0.0 106.577    
cufflinks 29.4089 0.0 97.602 High  
cufflinks 26.4298 0.0 86.9265    
cufflinks 31.7999 0.0 106.382 High  
cufflinks 29.215 0.0 96.8168    
cufflinks 26.943 0.0 87.8395    

0 Strain