Gene : Phvul.005G134000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31223:SF23 - CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 Genomic Order:  1349
Name:  ? Phvul.005G134000 Secondary Identifier:  ? PAC:37154066
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G134000 0.5kb upstream 0.5kb upstream 4341 true Chr05: 37404368-37408708 Phaseolus vulgaris
Phvul.005G134000 0.5kb upstream 0.5kb upstream 500 false Chr05: 37404368-37404867 Phaseolus vulgaris
Phvul.005G134000 0.5kb downstream 0.5kb downstream 4341 true Chr05: 37404868-37409208 Phaseolus vulgaris
Phvul.005G134000 0.5kb downstream 0.5kb downstream 500 false Chr05: 37408709-37409208 Phaseolus vulgaris
Phvul.005G134000 1.0kb upstream 1.0kb upstream 4841 true Chr05: 37403868-37408708 Phaseolus vulgaris
Phvul.005G134000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37403868-37404867 Phaseolus vulgaris
Phvul.005G134000 1.0kb downstream 1.0kb downstream 4841 true Chr05: 37404868-37409708 Phaseolus vulgaris
Phvul.005G134000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37408709-37409708 Phaseolus vulgaris
Phvul.005G134000 2.0kb upstream 2.0kb upstream 5841 true Chr05: 37402868-37408708 Phaseolus vulgaris
Phvul.005G134000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37402868-37404867 Phaseolus vulgaris
Phvul.005G134000 2.0kb downstream 2.0kb downstream 5841 true Chr05: 37404868-37410708 Phaseolus vulgaris
Phvul.005G134000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37408709-37410708 Phaseolus vulgaris
Phvul.005G134000 5.0kb upstream 5.0kb upstream 8841 true Chr05: 37399868-37408708 Phaseolus vulgaris
Phvul.005G134000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37399868-37404867 Phaseolus vulgaris
Phvul.005G134000 5.0kb downstream 5.0kb downstream 8841 true Chr05: 37404868-37413708 Phaseolus vulgaris
Phvul.005G134000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37408709-37413708 Phaseolus vulgaris
Phvul.005G134000 10.0kb upstream 10.0kb upstream 13841 true Chr05: 37394868-37408708 Phaseolus vulgaris
Phvul.005G134000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37394868-37404867 Phaseolus vulgaris
Phvul.005G134000 10.0kb downstream 10.0kb downstream 13841 true Chr05: 37404868-37418708 Phaseolus vulgaris
Phvul.005G134000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37408709-37418708 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315121 5265 Fabidae View MSA
124062112 5270 Rosid View MSA
123753527 5271 Pentapetalae View MSA
122796499 5272 Eudicot View MSA
122046742 5273 Angiosperm View MSA
121351757 5274 Embryophyte View MSA
123427506 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.6579 0.0 81.8777   High
cufflinks 49.6496 0.0 130.319 High High
cufflinks 6.99445 0.0 19.525    
cufflinks 2.65968 0.0 8.31187    
cufflinks 2.62058 0.0 8.22022    
cufflinks 8.0789 0.0 22.2738    
cufflinks 1.10267 0.0 3.7578    
cufflinks 1.15613 0.0 3.90945    
cufflinks 0.256314 0.0 0.998668 Low Low
cufflinks 21.7146 0.0 56.3561    
cufflinks 3.96573 0.0 11.805    

0 Strain